RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CAPN3P20807 821 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 ELK4P28324 431 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CDKN2CP42773 168 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CRATP43155 626 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CPA2P48052 419 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 ATP4BP51164 291 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CCR4P51679 360 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 AGFG1P52594 562 aaKnown RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 SUCLG1P53597 346 aaKnown RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CLDN20P56880 219 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 KCNJ10P78508 379 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 TLE4Q04727 773 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 MYBPHQ13203 477 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 SQLEQ14534 574 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 PON3Q15166 354 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 FBXL19-AS1Q494R0 122 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 TIGD2Q4W5G0 525 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 AP1ARQ63HQ0 302 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 TYW3Q6IPR3 259 aaKnown RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CBLN3Q6UW01 205 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 LILRA2Q8N149 483 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 ACBD4Q8NC06 268 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 RELL2Q8NC24 303 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 FBXO27Q8NI29 283 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF563Q8TA94 476 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 ZFP90Q8TF47 636 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 STON2Q8WXE9 905 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 MRGPRX4Q96LA9 322 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 RNF145Q96MT1 663 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 TRNT1Q96Q11 434 aaKnown RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 TREX2Q9BQ50 279 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 EBF4Q9BQW3 602 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 TPT1P8Q9HAU6 139 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 FANCFQ9NPI8 374 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 NPDC1Q9NQX5 325 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 MRGBPQ9NV56 204 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 CCDC167Q9P0B6 97 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 P2RX2Q9UBL9 471 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 ICAM5Q9UMF0 924 aa9.43□□□□□ -0.9
MCF2L-216ENST00000439475 PRRC2CQ9Y520 2896 aaKnown RBP9.43□□□□□ -0.9
MCF2L-216ENST00000439475 PKDREJQ9NTG1 2253 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 KDM4EB2RXH2 506 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 SHISA8B8ZZ34 492 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 CLIC1O00299 241 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 HMGN4O00479 90 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 KIAA0513O60268 411 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 EDF1O60869 148 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 H6PDO95479 791 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 TGM6O95932 706 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 PLGP00747 810 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 DBIP07108 87 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 UBTFL6P0CB48 400 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 UQCRBP14927 111 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 IL7RP16871 459 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 IGFBP2P18065 325 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 NCF2P19878 526 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 PPIBP23284 216 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 FKBP2P26885 142 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 KIR2DL3P43628 341 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 SLC6A8P48029 635 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 CRISP3P54108 245 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 CARD18P57730 90 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 DSTNP60981 165 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 CHRNEQ04844 493 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 SELENBP1Q13228 472 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 QPRTQ15274 297 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 ZSWIM7Q19AV6 140 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 HBMQ6B0K9 141 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 MED12LQ86YW9 2145 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 CMIPQ8IY22 773 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 GCNT2Q8N0V5 402 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 CNEP1R1Q8N9A8 125 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 OR9I1Q8NGQ6 314 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 OR2V1Q8NHB1 315 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 POC1BQ8TC44 478 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 PNPT1Q8TCS8 783 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 GPR119Q8TDV5 335 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 ST8SIA1Q92185 356 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 FIG4Q92562 907 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 OSTF1Q92882 214 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 VPS33AQ96AX1 596 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 SPDL1Q96EA4 605 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 KLHL15Q96M94 604 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 THUMPD3Q9BV44 507 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 RBM24Q9BX46 236 aaKnown RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 ARMC7Q9H6L4 198 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 MCCC2Q9HCC0 563 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 PRDM4Q9UKN5 801 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 PACSIN3Q9UKS6 424 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF232Q9UNY5 417 aa9.42□□□□□ -0.9
MCF2L-216ENST00000439475 SPIN1Q9Y657 262 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-216ENST00000439475 A8MXE2 369 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 EVPLLA8MZ36 301 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 H0YC42 278 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 MSTNO14793 375 aa9.41□□□□□ -0.9
MCF2L-216ENST00000439475 ADAMDEC1O15204 470 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms