RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ZNF821O75541 412 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 SP9P0CG40 484 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 PRR23D2P0DMB1 279 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 RNF144AP50876 292 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 SYTL3Q4VX76 610 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 LRRC73Q5JTD7 316 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CMIPQ8IY22 773 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 OR56B4Q8NH76 319 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 GNPDA2Q8TDQ7 276 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ACTR6Q9GZN1 396 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MCCC2Q9HCC0 563 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CD93Q9NPY3 652 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MMP17Q9ULZ9 603 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 BAIAP2Q9UQB8 552 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 SIRT4Q9Y6E7 314 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 THADAQ6YHU6 1953 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ZNF292O60281 2723 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 SLC9B1P1A6NJY1 282 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 WASH3PC4AMC7 463 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 LILRB5O75023 590 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 RGS11O94810 467 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 APODP05090 189 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 PROS1P07225 676 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ANKRD34CP0C6C1 535 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 DRD5P21918 477 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MAPK9P45984 424 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MEF2AQ02078 507 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 SYPL1Q16563 259 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 FAM198BQ6UWH4 519 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 RASSF6Q6ZTQ3 369 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 SYT13Q7L8C5 426 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 LILRA3Q8N6C8 439 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 OR6T1Q8NGN1 323 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MOSPD2Q8NHP6 518 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 TMEM159Q96B96 161 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ART5Q96L15 291 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 PRRC1Q96M27 445 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 DPYSL5Q9BPU6 564 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CHIAQ9BZP6 476 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 THAP10Q9P2Z0 257 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 PRAMEF27A3QJZ7 478 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 LGALS8O00214 317 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 BNIP3LO60238 219 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ALDOBP05062 364 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 C1GALT1C1LP0DN25 315 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 B2MP61769 119 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MRPS21P82921 87 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 HSPB3Q12988 150 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ZNF528Q3MIS6 628 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 FAM27D1Q5T7N8 215 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ZDHHC20Q5W0Z9 365 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 HIST2H2AA3Q6FI13 130 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 BBS1Q8NFJ9 593 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ZFP3Q96NJ6 502 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 C7orf50Q9BRJ6 194 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 EFCAB11Q9BUY7 163 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 DDX31Q9H8H2 851 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 NKIRAS2Q9NYR9 191 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 RPS6KB2Q9UBS0 482 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CLEC4AQ9UMR7 237 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MRPS7Q9Y2R9 242 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 DYRK1BQ9Y463 629 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 WDFY3Q8IZQ1 3526 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 A0A087WUU8 490 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 A8MXK9 166 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 WDPCPO95876 746 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 WNT1P04628 370 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 NMBP08949 121 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 NPPBP16860 134 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 CXCL2P19875 107 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 HOXA6P31267 233 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 MMP15P51511 669 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 TBPL1P62380 186 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 TMEM44Q2T9K0 475 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 LRFN4Q6PJG9 635 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 SEZ6L2Q6UXD5 910 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 OLIG3Q7RTU3 272 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 HMGN2P46Q86SG4 172 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 LMNTD1Q8N9Z9 388 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 C7orf57Q8NEG2 295 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 TTLQ8NG68 377 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 OR2AP1Q8NGE2 309 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 OR4Q3Q8NH05 313 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 FCRL4Q96PJ5 515 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 SARGQ9BW04 601 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 CNIH4Q9P003 139 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 EMC3Q9P0I2 261 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 FBXO4Q9UKT5 387 aa7.96□□□□□ -1.13
HPS4-206ENST00000439453 A0A0G2JK05 382 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 SURF4O15260 269 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 PEX14O75381 377 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 KLF8O95600 359 aaPredicted RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 TFP02787 698 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 FCER2P06734 321 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 GNSP15586 552 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 POU3F2P20265 443 aaPredicted RBP7.96□□□□□ -1.14
HPS4-206ENST00000439453 HTR1FP30939 366 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 TRIM23P36406 574 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 BDH1Q02338 343 aa7.96□□□□□ -1.14
HPS4-206ENST00000439453 TSPAN31Q12999 210 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms