RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CRNNQ9UBG3 495 aaPredicted RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC7A7Q9UM01 511 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 YARS2Q9Y2Z4 477 aaKnown RBP12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
PTCHD3-201ENST00000438700 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 CSF3P09919 207 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 ACP2P11117 423 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 IFNA8P32881 189 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 KIR2DL3P43628 341 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 MLLT11Q13015 90 aaPredicted RBP12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 PEX5LQ8IYB4 626 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 GATAD2BQ8WXI9 593 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC41A3Q96GZ6 507 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 MIXL1Q9H2W2 232 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 CAPN10Q9HC96 672 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 TOR4AQ9NXH8 423 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 STUB1Q9UNE7 303 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 PRODHO43272 600 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 FGF17O60258 216 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 YES1P07947 543 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 GKN3PP0CG01 181 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 IFI30P13284 250 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 MTNR1AP48039 350 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 GFERP55789 205 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SHC2P98077 582 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 ZXDAP98168 799 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 DBPQ10586 325 aaPredicted RBP12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SRSF5Q13243 272 aaKnown RBP12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 EFR3AQ14156 821 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 MANEAQ5SRI9 462 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 OR9Q1Q8NGQ5 310 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 ACOT11Q8WXI4 607 aaPredicted RBP12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 FBXO34Q9NWN3 711 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 SEC14L4Q9UDX3 406 aa12.87□□□□□ -0.35
PTCHD3-201ENST00000438700 CACNA1EQ15878 2313 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 GALR3O60755 368 aaPredicted RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CDRT1O95170 752 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CRYZL1O95825 349 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 PRG2P13727 222 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 ENDOUP21128 410 aaKnown RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 MYL9P24844 172 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CD79BP40259 229 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 GAS1P54826 345 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CAV3P56539 151 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 EXOSC7Q15024 291 aaKnown RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 MAPK14Q16539 360 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC25A30Q5SVS4 291 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 RASSF6Q6ZTQ3 369 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 MCATQ8IVS2 390 aaKnown RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 YIPF7Q8N8F6 280 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 NLGN4YQ8NFZ3 816 aaPredicted RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 OR4Q3Q8NH05 313 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 TM9SF4Q92544 642 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 SDF2Q99470 211 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 SLA2Q9H6Q3 261 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 TRIM45Q9H8W5 580 aaPredicted RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 HYKKA2RU49 373 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CCDC182A6NF36 153 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 PEX12O00623 359 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 CDC42EP2O14613 210 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 PLA2G10O15496 165 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 NT5EP21589 574 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 RFX3P48380 749 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 DHPSP49366 369 aaPredicted RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 RORCP51449 518 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 NKAIN2Q5VXU1 208 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 OTULINQ96BN8 352 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 RACGAP1Q9H0H5 632 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 NTMQ9P121 344 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
PTCHD3-201ENST00000438700 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SGK494L7N484 410 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 SLC2A10O95528 541 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 TSPAN19P0C672 248 aa12.85□□□□□ -0.35
PTCHD3-201ENST00000438700 FUT1P19526 365 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 2141.7 ms