RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TOR1AIP2Q8NFQ8 470 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 DUSP19Q8WTR2 217 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 NRBF2Q96F24 287 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 CIB1Q99828 191 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 C9orf16Q9BUW7 83 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 TRIM2Q9C040 744 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 TMEM27Q9HBJ8 222 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 CPNE5Q9HCH3 593 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 GALNT9Q9HCQ5 603 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 CTPS2Q9NRF8 586 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 ANKRD10Q9NXR5 420 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 ICAM5Q9UMF0 924 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 WIF1Q9Y5W5 379 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 KCNMB2Q9Y691 235 aa21.02■□□□□ 0.96
CPSF4-204ENST00000436336 UQCRBP14927 111 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 P2RX1P51575 399 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 OC90Q02509 493 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-204ENST00000436336 ST3GAL3Q11203 375 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 SHQ1Q6PI26 577 aaKnown RBP21.01■□□□□ 0.95
CPSF4-204ENST00000436336 LINC00696Q6ZRV3 163 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 TMEM179BQ7Z7N9 219 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 ZDHHC13Q8IUH4 622 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 CATSPER1Q8NEC5 780 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 SH3YL1Q96HL8 342 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-204ENST00000436336 UTP23Q9BRU9 249 aaKnown RBP21.01■□□□□ 0.95
CPSF4-204ENST00000436336 ANGPTL4Q9BY76 406 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 VCX3BQ9H321 246 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 NTNG1Q9Y2I2 539 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 ANKRD33BA6NCL7 494 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 G3V2T6 193 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 LINGO3P0C6S8 592 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 CCL3P10147 92 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 THRBP10828 461 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 RYKP34925 604 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 LIMS1P48059 325 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 CCL11P51671 97 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 CCR4P51679 360 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 RAPSNQ13702 412 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 LRRC36Q1X8D7 754 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 ZNF613Q6PF04 617 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 HIPK1Q86Z02 1210 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 EPHX4Q8IUS5 362 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 OR4C15Q8NGM1 316 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 B4GALNT2Q8NHY0 566 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 SDCCAG3Q96C92 435 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 ZNF552Q9H707 407 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-204ENST00000436336 PPP4R1LQ9P1A2 415 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 LRFN1Q9P244 771 aa21.01■□□□□ 0.95
CPSF4-204ENST00000436336 A0A1W2PRQ8 180 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 TRAPPC13A5PLN9 417 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 FAAHO00519 579 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 CD96P40200 585 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 VHLP40337 213 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 COPZ1P61923 177 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 MFAP5Q13361 173 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 TUBA3CQ13748 450 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 DGCR6Q14129 220 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 PRAMEF20Q5VT98 475 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 BROXQ5VW32 411 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 TUBA3EQ6PEY2 450 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 MDGA2Q7Z553 956 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 OR52J3Q8NH60 311 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 OR5W2Q8NH69 310 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 NTNG2Q96CW9 530 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 ARSGQ96EG1 525 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 SLC41A3Q96GZ6 507 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 FRMD6Q96NE9 622 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 ANKRD19PQ9H560 264 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 PRDM4Q9UKN5 801 aa21■□□□□ 0.95
CPSF4-204ENST00000436336 IGLV3-32A0A0A0MS00 114 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 C2orf72A6NCS6 295 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 C17orf51A8MQB3 221 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 PEX1O43933 1283 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 WDPCPO95876 746 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 P04436 131 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 FUT4P22083 530 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 MSX1P28360 303 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 SUMO3P55854 103 aaPredicted RBP20.99■□□□□ 0.95
CPSF4-204ENST00000436336 CBFBQ13951 182 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 TRAM2Q15035 370 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 ZBTB49Q6ZSB9 765 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 GDF7Q7Z4P5 450 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 ZNF227Q86WZ6 799 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 DCBLD2Q96PD2 775 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 KLHL4Q9C0H6 718 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 RNF32Q9H0A6 362 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 MAN2C1Q9NTJ4 1040 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 SACM1LQ9NTJ5 587 aa20.99■□□□□ 0.95
CPSF4-204ENST00000436336 PGCP20142 388 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 ELAVL4P26378 380 aaKnown RBP20.98■□□□□ 0.95
CPSF4-204ENST00000436336 ITPKBP27987 946 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 EXOC3L2Q2M3D2 409 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 COL28A1Q2UY09 1125 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 FGD3Q5JSP0 725 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 PSD4Q8NDX1 1056 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 FDCSPQ8NFU4 85 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 ALPK1Q96QP1 1244 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 COQ10BQ9H8M1 238 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 PROK2Q9HC23 129 aa20.98■□□□□ 0.95
CPSF4-204ENST00000436336 TIMMDC1Q9NPL8 285 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms