RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 UBTFL6P0CB48 400 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 NR2F1P10589 423 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 BMP2P12643 396 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 SHC1P29353 583 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 CCR4P51679 360 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 ZNF41P51814 821 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 SUMO3P55854 103 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 ART3Q13508 389 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 SELPLGQ14242 412 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 RIPPLY2Q5TAB7 128 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 DHDDSQ86SQ9 333 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 GGNQ86UU5 652 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 LACC1Q8IV20 430 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 LIX1LQ8IVB5 337 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 GPR119Q8TDV5 335 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 SLC38A5Q8WUX1 472 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 MAL2Q969L2 176 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 ZBTB8AQ96BR9 441 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 TMEM19Q96HH6 336 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 PIGQQ9BRB3 760 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 CLCF1Q9UBD9 225 aa17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 LEF1Q9UJU2 399 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 INTS1Q8N201 2190 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-207ENST00000433555 SETXQ7Z333 2677 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 NKX2-6A6NCS4 301 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 MBD3L4A6NDZ8 208 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 MBD3L3A6NE82 208 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 AGAP5A6NIR3 686 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 MBD3L5A6NJ08 208 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 CD8B2A6NJW9 211 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 GTPBP1O00178 669 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 EFNA2O43921 213 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 HOXD4P09016 255 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 PEPDP12955 493 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 CHRNB4P30926 498 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 MAGEA8P43361 318 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 SEC24CP53992 1094 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 KLF10Q13118 480 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 DPP10Q8N608 796 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 OR10Q1Q8NGQ4 319 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 MBD3L2Q8NHZ7 208 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 ZPLD1Q8TCW7 415 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 ZNF845Q96IR2 970 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 UCK2Q9BZX2 261 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 LAT2Q9GZY6 243 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 TMEM185BQ9H7F4 350 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 HHATLQ9HCP6 504 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 GMEB1Q9Y692 573 aa17.05■□□□□ 0.32
RPUSD3-207ENST00000433555 ANGPT2O15123 496 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 EIF4E2O60573 245 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 DNAJA2O60884 412 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 CYP7B1O75881 506 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 NTN1O95631 604 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 NUDT14O95848 222 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 OPN1LWP04000 364 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 SNRPB2P08579 225 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 PRKCAP17252 672 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 HTR1EP28566 365 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 CEACAM8P31997 349 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 ZNF136P52737 540 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 FADDQ13158 208 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 QPRTQ15274 297 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 CTU2Q2VPK5 515 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 ZNF787Q6DD87 383 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 POMZP3Q6PJE2 187 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 EIF3MQ7L2H7 374 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 RELL2Q8NC24 303 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 OR5W2Q8NH69 310 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 FBXO27Q8NI29 283 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 WDR60Q8WVS4 1066 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 OIT3Q8WWZ8 545 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 CNOT9Q92600 299 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 TREX2Q9BQ50 279 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 THUMPD3Q9BV44 507 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 A4GALTQ9NPC4 353 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 DNAJB12Q9NXW2 375 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 COQ3Q9NZJ6 369 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 NDUFAF1Q9Y375 327 aa17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 KLF2Q9Y5W3 355 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-207ENST00000433555 FAM47E-STBD1D6RA91 191 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 AP3D1O14617 1153 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 TGM6O95932 706 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 ARAFP10398 606 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 MTPNP58546 118 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 CAPRIN1Q14444 709 aaKnown RBP17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 BCL2A1Q16548 175 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 RUNDC3AQ59EK9 446 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 ZNF836Q6ZNA1 936 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 VRK2Q86Y07 508 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 TOR1AIP2Q8NFQ8 470 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 CA5BP1Q8WTZ4 195 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 ASB5Q8WWX0 329 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 ADGRG7Q96K78 797 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 RSPO3Q9BXY4 272 aaPredicted RBP17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 RAD21L1Q9H4I0 556 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 ARMCX1Q9P291 453 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 SLC35A3Q9Y2D2 325 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 AP4B1Q9Y6B7 739 aa17.03■□□□□ 0.32
RPUSD3-207ENST00000433555 LINC01387J3KSC0 135 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms