RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 NDUFV2P19404 249 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 PNLIPRP1P54315 467 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 GPR85P60893 370 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 GNA13Q14344 377 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MORN1Q5T089 497 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 LDLRAD1Q5T700 205 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 PRPF38BQ5VTL8 546 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 HEPHL1Q6MZM0 1159 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 FAM83HQ6ZRV2 1179 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CMTM4Q8IZR5 234 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 OR1S1Q8NH92 325 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MACROD1Q9BQ69 325 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 DPH1Q9BZG8 443 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CAMK2AQ9UQM7 478 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 PLXNA3P51805 1871 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 ARPC4-TTLL3A0A0A6YYG9 625 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 H7C4K7 107 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 TMPRSS11DO60235 418 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 DUSP11O75319 330 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MC2RQ01718 297 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 LINC00303Q3SY05 128 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 TP53I3Q53FA7 332 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 IGSF11Q5DX21 431 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 TPRA1Q86W33 373 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 RASGRP3Q8IV61 690 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 OR5J2Q8NH18 312 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 PXYLP1Q8TE99 480 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MRPS24Q96EL2 167 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 ENKD1Q9H0I2 346 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 UBQLN3Q9H347 655 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 GLIPR2Q9H4G4 154 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 ZCCHC4Q9H5U6 513 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 ZNF304Q9HCX3 659 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MARCH5Q9NX47 278 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 ING1Q9UK53 422 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 PTP4A3O75365 173 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 EPXP11678 715 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 AKR1C2P52895 323 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 RAG2P55895 527 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CLDN2P57739 230 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 AKR1C1Q04828 323 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 PDSS1Q5T2R2 415 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 C22orf39Q6P5X5 142 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MEPCEQ7L2J0 689 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 OR9A1PQ8NGU1 263 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 LINC01599Q8WXQ3 324 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 MCHR1Q99705 422 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CCDC86Q9H6F5 360 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 WSB2Q9NYS7 404 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 TAC3Q9UHF0 121 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CYB5R1Q9UHQ9 305 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 FBXL4Q9UKA2 621 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 ASF1AQ9Y294 204 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 CA5BQ9Y2D0 317 aa10.75□□□□□ -0.69
HMGCS1-202ENST00000433297 DOCK6Q96HP0 2047 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 SLC5A10A0PJK1 596 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 CDHR4A6H8M9 788 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 H7BY64 318 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 TGM6O95932 706 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 RLN2P04090 185 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 HMGN1P05114 100 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 ZNF35P13682 527 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 GABRA1P14867 456 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 BMP7P18075 431 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 DCTDP32321 178 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 RAP2BP61225 183 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 FLI1Q01543 452 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PUS10Q3MIT2 529 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PRAMEF14Q5SWL7 426 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PRAMEF13Q5VWM6 474 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 KHDRBS2Q5VWX1 349 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 DNAJB7Q7Z6W7 309 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 OR51L1Q8NGJ5 315 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 C1orf216Q8TAB5 229 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 SMIM4Q8WVI0 70 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PRAP1Q96NZ9 151 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 SLC25A18Q9H1K4 315 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 GPN1Q9HCN4 374 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 NPDC1Q9NQX5 325 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 TAS2R10Q9NYW0 307 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 ACTR10Q9NZ32 417 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PCDHGA5Q9Y5G8 931 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 MAGEB1P43366 347 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 RECQLP46063 649 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 POLR2LP62875 67 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 DYRK1AQ13627 763 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 TMEM44Q2T9K0 475 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 C9orf64Q5T6V5 341 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 FCRLAQ7L513 359 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 SLC44A3Q8N4M1 653 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 OR10K1Q8NGX5 313 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 ELP4Q96EB1 424 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 OR14A2Q96R54 314 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 TIMP4Q99727 224 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 C7orf50Q9BRJ6 194 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 IL20Q9NYY1 176 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 PLCL2Q9UPR0 1127 aa10.74□□□□□ -0.69
HMGCS1-202ENST00000433297 LAMA2P24043 3122 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms