RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TRIM8Q9BZR9 551 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 OR2B2Q9GZK3 357 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 PAIP1Q9H074 479 aaKnown RBP5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 TPT1P8Q9HAU6 139 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 MED4Q9NPJ6 270 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 Q9UFV3 132 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 ABCG2Q9UNQ0 655 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 MRPS18CQ9Y3D5 142 aaKnown RBP5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 WDR45Q9Y484 360 aa5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 PHF3Q92576 2039 aaKnown RBP5.22□□□□□ -1.57
HMGB3P24-201ENST00000433260 CENPVL1A0A0U1RR11 272 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 LOC100653049A0A140TA62 436 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A1W2PQD3 144 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 OR2M5A3KFT3 312 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 SERINC4A6NH21 518 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CLDN24A6NM45 220 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 FAM90A27PA6NNH2 459 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 FAM47E-STBD1D6RA91 191 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF264O43296 627 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 EFNA2O43921 213 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 KRT34O76011 436 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 H6PDO95479 791 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 AGR2O95994 175 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 UBTFL6P0CB48 400 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 TROVE2P10155 538 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 PEPDP12955 493 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 GP1BBP13224 206 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CCNA2P20248 432 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CAPN3P20807 821 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 IL11P20809 199 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 EPHA1P21709 976 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 RYKP34925 604 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 LHX2P50458 406 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CCR4P51679 360 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF41P51814 821 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 SEC24CP53992 1094 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 GFRA1P56159 465 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CLDN18P56856 261 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CLDN20P56880 219 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 DSTNP60981 165 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 KCNJ10P78508 379 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 HPCAP84074 193 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 FUT5Q11128 374 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 SNTB1Q13884 538 aaKnown RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 TOMM34Q15785 309 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 NHSL2Q5HYW2 709 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 HEPHL1Q6MZM0 1159 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 AAGABQ6PD74 315 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 POMZP3Q6PJE2 187 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 LINC00114Q6XXX2 140 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 PM20D2Q8IYS1 436 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF619Q8N2I2 560 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 CHDHQ8NE62 594 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 FBXO27Q8NI29 283 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 POC1BQ8TC44 478 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 MIPOL1Q8TD10 442 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 PHF10Q8WUB8 498 aaKnown RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 MAL2Q969L2 176 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF524Q96C55 264 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 DNAJA3Q96EY1 480 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF845Q96IR2 970 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 TUBA1CQ9BQE3 449 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 PIGQQ9BRB3 760 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 PRDM14Q9GZV8 571 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 RABEP2Q9H5N1 569 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 TMEM185BQ9H7F4 350 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 SLC52A3Q9NQ40 469 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 ICAM5Q9UMF0 924 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 NDUFAF1Q9Y375 327 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 DNAJC13O75165 2243 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 HCFC1P51610 2035 aa5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 TLN1Q9Y490 2541 aaKnown RBP5.21□□□□□ -1.58
HMGB3P24-201ENST00000433260 HEATR5AQ86XA9 2040 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A096LPI6 279 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 IGLV3-32A0A0A0MS00 114 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A1W2PP18 115 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CLCA1A8K7I4 914 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 C5orf58C9J3I9 102 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 NPIPB9F8W1W9 429 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ANGPT2O15123 496 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 BCAS1O75363 584 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 TGM6O95932 706 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 AK1P00568 194 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CSTAP01040 98 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 BCHEP06276 602 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 NGFRP08138 427 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CHRM4P08173 479 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 HOXD4P09016 255 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 TFPTP0C1Z6 253 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZCCHC18P0CG32 403 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 UBL4AP11441 157 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CPN1P15169 458 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 IL7RP16871 459 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF708P17019 499 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 BMP5P22003 454 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CHMP24386 653 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 LCN1P31025 176 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 SFTPDP35247 375 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ANXA11P50995 505 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms