RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 OR10Z1Q8NGY1 313 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 SENP5Q96HI0 755 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-202ENST00000432306 DMRTA2Q96SC8 542 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 SEPT5Q99719 369 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF649Q9BS31 505 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 PRRG3Q9BZD7 231 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 MED28Q9H204 178 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 CLEC4MQ9H2X3 399 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-202ENST00000432306 C12orf4Q9NQ89 552 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 GKN1Q9NS71 199 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 PLA2G3Q9NZ20 509 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 AFF4Q9UHB7 1163 aaKnown RBP7.52□□□□□ -1.21
VTI1A-202ENST00000432306 MGAT4AQ9UM21 535 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 SPIN1Q9Y657 262 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-202ENST00000432306 CACNA1GO43497 2377 aa7.52□□□□□ -1.21
VTI1A-202ENST00000432306 EPG5Q9HCE0 2579 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 SCN8AQ9UQD0 1980 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 TRAV6A0A075B6T7 132 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 LOC102723532A0A0G2JNH3 316 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 MGAT4DA6NG13 374 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 URADA6NGE7 173 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ANKRD61A6NGH8 418 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 I3L521 148 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 BTN3A3O00478 584 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 GMFGO60234 142 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 HPGDSO60760 199 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 PSIP1O75475 530 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ETHE1O95571 254 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 IGHA1P01876 353 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 H1F0P07305 194 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ANXA2P07355 339 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 LIMS3P0CW19 117 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 LIMS4P0CW20 117 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 SULT1A3P0DMM9 295 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 SULT1A4P0DMN0 295 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 POU2F1P14859 743 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF250P15622 560 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 GSTM3P21266 225 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 UQCRC2P22695 453 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 SSTR4P31391 388 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ATP5C1P36542 298 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 MMP12P39900 470 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 WNT5AP41221 380 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ZXDBP98169 803 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 MXD1Q05195 221 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 TWF1Q12792 350 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 GPR17Q13304 367 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 IL18Q14116 193 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 SLC5A12Q1EHB4 618 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 FAM71E1Q6IPT2 247 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 C1orf94Q6P1W5 598 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 WDR53Q7Z5U6 358 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 OAFQ86UD1 273 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF655Q8N720 491 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 TCEANCQ8N8B7 351 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 TMEM105Q8N8V8 129 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 DCAF4L2Q8NA75 395 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 OR11H7Q8NGC8 314 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 OR11H4Q8NGC9 324 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 OR52N1Q8NH53 320 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 OR56A3Q8NH54 315 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 KCNE4Q8WWG9 221 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ADAMTS14Q8WXS8 1223 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 VOPP1Q96AW1 172 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 PLPPR2Q96GM1 343 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 PPP1R16AQ96I34 528 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 LCORQ96JN0 433 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 KLHL15Q96M94 604 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 RNF32Q9H0A6 362 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 SHARPINQ9H0F6 387 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 POLR2J3Q9H1A7 115 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 PPIL3Q9H2H8 161 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 UBQLN2Q9UHD9 624 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 ATXN7L1Q9ULK2 861 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 PADI3Q9ULW8 664 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 EXOGQ9Y2C4 368 aaKnown RBP7.51□□□□□ -1.21
VTI1A-202ENST00000432306 CEP250Q9BV73 2442 aa7.51□□□□□ -1.21
VTI1A-202ENST00000432306 A0A1W2PRB8 838 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 PMS2P1A4D2B8 440 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 TOR1AO14656 332 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 CASKO14936 926 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 CHST10O43529 356 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 AKAP8O43823 692 aaKnown RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SLC28A2O43868 658 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 VEGFDO43915 354 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 MMP20O60882 483 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ITGA10O75578 1167 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 SLCO2B1O94956 709 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 IFNA16P05015 189 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 ALPIP09923 528 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 AHCYP23526 432 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 EPHA8P29322 1005 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 CALCRP30988 508 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 HNF1BP35680 557 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 OPRD1P41143 372 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 HAAOP46952 286 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 KCNJ5P48544 419 aa7.5□□□□□ -1.21
VTI1A-202ENST00000432306 TUFMP49411 452 aaKnown RBP7.5□□□□□ -1.21
VTI1A-202ENST00000432306 DSTNP60981 165 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms