RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 YRDCQ86U90 279 aaKnown RBP11.26□□□□□ -0.61
USP40-205ENST00000430158 GRAMD2AQ8IUY3 354 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 CMIPQ8IY22 773 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 GHDCQ8N2G8 530 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 CLIP4Q8N3C7 705 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 HIPK4Q8NE63 616 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 TOR1AIP2Q8NFQ8 470 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 OR4K17Q8NGC6 315 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 B4GALNT2Q8NHY0 566 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 NEIL3Q8TAT5 605 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 PHOSPHO1Q8TCT1 267 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 PIF1Q9H611 641 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 HHATLQ9HCP6 504 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 EXOSC3Q9NQT5 275 aaKnown RBP11.26□□□□□ -0.61
USP40-205ENST00000430158 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.26□□□□□ -0.61
USP40-205ENST00000430158 DNAJB12Q9NXW2 375 aaKnown RBP11.26□□□□□ -0.61
USP40-205ENST00000430158 B4GALT7Q9UBV7 327 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 SLC35A3Q9Y2D2 325 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 ARHGAP21Q5T5U3 1957 aa11.26□□□□□ -0.61
USP40-205ENST00000430158 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 TRGV5A0A0B4J1U4 118 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 ANKUB1A6NFN9 424 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 FAM220BPB1ANY3 271 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 H3BNH8 94 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 PYCARD-AS1I3L0S3 204 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 HCRTR2O43614 444 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 TPST1O60507 370 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 MFN2O95140 757 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 CSTAP01040 98 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 UBL4AP11441 157 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 BMP7P18075 431 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 GNLYP22749 145 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 ACAA2P42765 397 aaKnown RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 P2RX1P51575 399 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 HPCAP84074 193 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 SLC25A3Q00325 362 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 LIPEQ05469 1076 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 CRYZQ08257 329 aaKnown RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 DMTNQ08495 405 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 VEZF1Q14119 521 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 GANABQ14697 944 aaKnown RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 FXNQ16595 210 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 CYP51A1Q16850 503 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 PLPPR5Q32ZL2 321 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 SLC25A53Q5H9E4 307 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 DCST1Q5T197 706 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 MRPL2Q5T653 305 aaKnown RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 DHRS4L2Q6PKH6 230 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 GFRALQ6UXV0 394 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 PEX5LQ8IYB4 626 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 OR5W2Q8NH69 310 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 WDR60Q8WVS4 1066 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 TAMM41Q96BW9 452 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 SH3YL1Q96HL8 342 aaPredicted RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 MED17Q9NVC6 651 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 RLIMQ9NVW2 624 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 TAS2R10Q9NYW0 307 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 CD300AQ9UGN4 299 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 ZNF443Q9Y2A4 671 aaPredicted RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 AP3M1Q9Y2T2 418 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 SLC6A5Q9Y345 797 aa11.25□□□□□ -0.61
USP40-205ENST00000430158 USP9YO00507 2555 aaPredicted RBP11.25□□□□□ -0.61
USP40-205ENST00000430158 DOPEY2Q9Y3R5 2298 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 A0A087WZY1 265 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 OR14I1A6ND48 311 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 TMEM247A6NEH6 219 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 PRORSD1PA6NEY8 169 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 C5orf58C9J3I9 102 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 M0QX08 132 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 UBOX5O94941 541 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 STSP08842 583 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 UBTFL6P0CB48 400 aaPredicted RBP11.24□□□□□ -0.61
USP40-205ENST00000430158 CD247P20963 164 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 PRKAR1BP31321 381 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 GSK3BP49841 420 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 CLDN15P56746 228 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 LIN52Q52LA3 116 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 ARHGAP11AQ6P4F7 1023 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 ERICH5Q6P6B1 374 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 MICU2Q8IYU8 434 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 PGAM4Q8N0Y7 254 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 GTPBP8Q8N3Z3 284 aaPredicted RBP11.24□□□□□ -0.61
USP40-205ENST00000430158 ZNF614Q8N883 585 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 RBM15BQ8NDT2 890 aaKnown RBP11.24□□□□□ -0.61
USP40-205ENST00000430158 GPR32P1Q8NGA4 272 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 TIMP4Q99727 224 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 WFDC6Q9BQY6 131 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 UGT2B28Q9BY64 529 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 ANGPT4Q9Y264 503 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 PTPN13Q12923 2485 aa11.24□□□□□ -0.61
USP40-205ENST00000430158 ALPK2Q86TB3 2170 aa11.23□□□□□ -0.61
USP40-205ENST00000430158 CACNA1CQ13936 2221 aa11.23□□□□□ -0.61
USP40-205ENST00000430158 ICE1Q9Y2F5 2266 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms