RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MBD3L3A6NE82 208 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-204ENST00000430071 MBD3L5A6NJ08 208 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-204ENST00000430071 CD8B2A6NJW9 211 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 H0YC42 278 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 UTS2O95399 124 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 IL2RAP01589 272 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 NUDT7P0C024 238 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 DPP4P27487 766 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 PRDX6P30041 224 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 PSMD4P55036 377 aaKnown RBP15.31■□□□□ 0.04
UBE3D-204ENST00000430071 TPD52P55327 224 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-204ENST00000430071 CLDN18P56856 261 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 MTPNP58546 118 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 TXNL4AP83876 142 aaKnown RBP15.31■□□□□ 0.04
UBE3D-204ENST00000430071 MAPK11Q15759 364 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 GRAMD1BQ3KR37 738 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 ARHGAP11BQ3KRB8 267 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 ATAD3BQ5T9A4 648 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 ARSKQ6UWY0 536 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 C16orf62Q7Z3J2 963 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 ADGRE4PQ86SQ3 457 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 IFNEQ86WN2 208 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 FADS6Q8N9I5 356 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 OR4C3Q8NH37 302 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 MBD3L2Q8NHZ7 208 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-204ENST00000430071 DUSP19Q8WTR2 217 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 LRRC58Q96CX6 371 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 KLHDC3Q9BQ90 382 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 ZNF559Q9BR84 538 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 EXD2Q9NVH0 621 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 ARL8BQ9NVJ2 186 aa15.31■□□□□ 0.04
UBE3D-204ENST00000430071 NPIPA5A0A0B4J1W7 369 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 SHISA8B8ZZ34 492 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 NPIPA7E9PJI5 369 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 AIM2O14862 343 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 GMFGO60234 142 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 FCMRO60667 390 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 TNFRSF21O75509 655 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 AGR2O95994 175 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 AK1P00568 194 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 NPIPA8P0DM63 369 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 BMP2P12643 396 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 PPIBP23284 216 aaKnown RBP15.3■□□□□ 0.04
UBE3D-204ENST00000430071 UQCRC1P31930 480 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 ANXA11P50995 505 aaKnown RBP15.3■□□□□ 0.04
UBE3D-204ENST00000430071 CLDN15P56746 228 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 DSTNP60981 165 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 MYBPHQ13203 477 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 SYPL1Q16563 259 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 ZZZ3Q8IYH5 903 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 ANKFN1Q8N957 763 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 PCYOX1LQ8NBM8 494 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 ZPLD1Q8TCW7 415 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 ROPN1LQ96C74 230 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 CMTM5Q96DZ9 223 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 SFXN2Q96NB2 322 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 NPAS1Q99742 590 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 ZNF350Q9GZX5 532 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 RAD21L1Q9H4I0 556 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 CALHM2Q9HA72 323 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 PPP4R1LQ9P1A2 415 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 DKKL1Q9UK85 242 aa15.3■□□□□ 0.04
UBE3D-204ENST00000430071 CLCA1A8K7I4 914 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 H0Y3Z8 333 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 SYT5O00445 386 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 DVL2O14641 736 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 NPPAP01160 153 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 CHRM4P08173 479 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 ZNF708P17019 499 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 GPX2P18283 190 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 FADDQ13158 208 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 RABL3Q5HYI8 236 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 NANOGP8Q6NSW7 305 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 MTERF4Q7Z6M4 381 aaKnown RBP15.29■□□□□ 0.04
UBE3D-204ENST00000430071 CDH24Q86UP0 819 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 OR4K17Q8NGC6 315 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 NANOGQ9H9S0 305 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 GID8Q9NWU2 228 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 CRIM1Q9NZV1 1036 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 CLCF1Q9UBD9 225 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 KCNN3Q9UGI6 736 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 MKLN1Q9UL63 735 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 ROS1P08922 2347 aa15.29■□□□□ 0.04
UBE3D-204ENST00000430071 CENPVL1A0A0U1RR11 272 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 EVPLLA8MZ36 301 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 FAM47E-STBD1D6RA91 191 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 NPIPB9F8W1W9 429 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 STX11O75558 287 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 H6PDO95479 791 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 OXSR1O95747 527 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-204ENST00000430071 TGM6O95932 706 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 TFPTP0C1Z6 253 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 ATP6V1C1P21283 382 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 TBXA2RP21731 343 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 CTSSP25774 331 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 LCN1P31025 176 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 CPA2P48052 419 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 ASCL1P50553 236 aa15.28■□□□□ 0.04
UBE3D-204ENST00000430071 SUCLG1P53597 346 aaKnown RBP15.28■□□□□ 0.04
UBE3D-204ENST00000430071 DSCR4P56555 118 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms