RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 DDTP30046 118 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PPP1R8Q12972 351 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PLA2G7Q13093 441 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 MOGAT2Q3SYC2 334 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TMEM107Q6UX40 140 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 C17orf107Q6ZR85 190 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 SPATA31D4Q6ZUB0 917 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 C9orf62Q8N4C0 152 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 BBS1Q8NFJ9 593 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 OR5M9Q8NGP3 310 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 C14orf79Q96F83 325 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TSGA13Q96PP4 275 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 DUSP26Q9BV47 211 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PINK1Q9BXM7 581 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 OSBPL2Q9H1P3 480 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 ZFP37Q9Y6Q3 630 aaPredicted RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CHURC1-FNTBB4DL54 471 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 G3V3Q6 166 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 GDI1P31150 447 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 RFX2P48378 723 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CLDN8P56748 225 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 RAVER1Q8IY67 606 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 LCN9Q8WX39 176 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 NELFAQ9H3P2 528 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 GTPBP1O00178 669 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TPST2O60704 377 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 EIF1BO60739 113 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 HLA-DQB1P01920 261 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CST2P09228 141 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 SLC35E2BP0CK96 405 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 EIF1P41567 113 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 GCGRP47871 477 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 ERV3-1Q14264 604 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 POU4F3Q15319 338 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CXCL17Q6UXB2 119 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 AVL9Q8NBF6 648 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 AQP11Q8NBQ7 271 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 SCAMP5Q8TAC9 235 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 BBS10Q8TAM1 723 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 KCTD13Q8WZ19 329 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CLSTN3Q9BQT9 956 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PCDHB14Q9Y5E9 798 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 LY75O60449 1722 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 FARS2O95363 451 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 DCNP07585 359 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CALCBP10092 127 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 LAP3P28838 519 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CORO1AP31146 461 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 GPLD1P80108 840 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 GPR68Q15743 365 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 COL5A1-AS1Q5SY13 56 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CPZQ66K79 652 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 OOSP2Q86WS3 158 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 ZNF417Q8TAU3 575 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CACFD1Q9UGQ2 172 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 EXO1Q9UQ84 846 aaKnown RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PCDH8O95206 1070 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 LATS1O95835 1130 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 ANXA4P09525 319 aaPredicted RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 GPR17Q13304 367 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 KIAA0141Q14154 515 aaPredicted RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PSMG4Q5JS54 123 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 WDR74Q6RFH5 385 aaPredicted RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 LBX2Q6XYB7 198 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 NPRL2Q8WTW4 380 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 PLK3Q9H4B4 646 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 RFPL4AA6NLU0 287 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TTLL8A6PVC2 850 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 RFPL4AL1F8VTS6 287 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TOXO94900 526 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TAF10Q12962 218 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 POM121L1PQ3SYA9 428 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 FJX1Q86VR8 437 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 FBXO15Q8NCQ5 510 aaPredicted RBP7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 KLRG1Q96E93 195 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 LYSMD1Q96S90 227 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 TLR9Q9NR96 1032 aa7.1□□□□□ -1.27
SYNPO2-202ENST00000429713 NYNRINQ9P2P1 1898 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 LY86O95711 162 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 CAMLGP49069 296 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 STK19P49842 368 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 WDR5P61964 334 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 SCARB2Q14108 478 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 GANABQ14697 944 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 UCN3Q969E3 161 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 KCNJ15Q99712 375 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 ALPK3Q96L96 1907 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 MEIKINA0A087WXM9 373 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 S1PR4O95977 384 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 DUSP28Q4G0W2 176 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 GLT8D1Q68CQ7 371 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 BTNL3Q6UXE8 466 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 RNF165Q6ZSG1 346 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 OR10H4Q8NGA5 316 aa7.09□□□□□ -1.27
SYNPO2-202ENST00000429713 OR2T4Q8NH00 348 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms