RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 DUSP5Q16690 384 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 TEX44Q53QW1 395 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 HSP90AA4PQ58FG1 418 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 TECRLQ5HYJ1 363 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 MLIPQ5VWP3 458 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 SCARA5Q6ZMJ2 495 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 RFPL4BQ6ZWI9 263 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 USP50Q70EL3 339 aaPredicted RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 ISCA2Q86U28 154 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 NKAIN4Q8IVV8 208 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 MICU2Q8IYU8 434 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 METTL27Q8N6F8 245 aaPredicted RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 ASCC1Q8N9N2 400 aaKnown RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 APOBEC4Q8WW27 367 aaKnown RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 FAM3CQ92520 227 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 RAB1CQ92928 201 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 SLCO2A1Q92959 643 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 SLC38A4Q969I6 547 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 CIDECQ96AQ7 238 aaPredicted RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 IL17FQ96PD4 163 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 TGS1Q96RS0 853 aaKnown RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 RIT2Q99578 217 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 FBXO44Q9H4M3 255 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 MRPS30Q9NP92 439 aaKnown RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 NLGN3Q9NZ94 848 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 STX18Q9P2W9 335 aaKnown RBP4.78□□□□□ -1.64
LINC00348-201ENST00000428761 POLKQ9UBT6 870 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 PPIAL4AQ9Y536 164 aa4.78□□□□□ -1.64
LINC00348-201ENST00000428761 LY75O60449 1722 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 GAKO14976 1311 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TRAV6A0A075B6T7 132 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 A0A087WZ39 114 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 A0A1W2PPV4 95 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 A8MU76 341 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 HAS3O00219 553 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 HIP1O00291 1037 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 BTN3A3O00478 584 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TPST2O60704 377 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ZBTB11O95625 1053 aaPredicted RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 HPRP00739 348 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 MBP02144 154 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 VTNP04004 478 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 GPIP06744 558 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 PRPS2P11908 318 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 POU2F1P14859 743 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TSPAN8P19075 237 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 RORAP35398 523 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 PLTPP55058 493 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 CDH6P55285 790 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 YWHAEP62258 255 aaKnown RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 HERVK_113P63132 956 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ERVK-8P63133 956 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 SARNPP82979 210 aaKnown RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ASPHQ12797 758 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TGFBIQ15582 683 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 SYPL1Q16563 259 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ACSF3Q4G176 576 aaPredicted RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 SBK1Q52WX2 424 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 LIPNQ5VXI9 398 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 OR2A2Q6IF42 318 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 SLC25A25Q6KCM7 469 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 DOK6Q6PKX4 331 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TMEM220Q6QAJ8 160 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TMEM207Q6UWW9 146 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 NFE4Q86UQ8 179 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 PARGQ86W56 976 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 CACUL1Q86Y37 369 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 FAM58AQ8N1B3 248 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ELMOD1Q8N336 334 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ZNF843Q8N446 348 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 CCDC197Q8NCU1 140 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 OR1L4Q8NGR5 311 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 C8orf46Q8TAG6 207 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 CD300LFQ8TDQ1 290 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 HPSE2Q8WWQ2 592 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 SMPDL3AQ92484 453 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ELMO1Q92556 727 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TM4SF19Q96DZ7 209 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 IL12RB2Q99665 862 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 KCNS3Q9BQ31 491 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 CENPKQ9BS16 269 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ERVK-6Q9BXR3 956 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 FNDC4Q9H6D8 234 aaPredicted RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 DDX31Q9H8H2 851 aaKnown RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 LPAR2Q9HBW0 351 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 POLD4Q9HCU8 107 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 MAN2C1Q9NTJ4 1040 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 IL20Q9NYY1 176 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 POMT2Q9UKY4 750 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 GAB2Q9UQC2 676 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 GSTK1Q9Y2Q3 226 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 RHBDD3Q9Y3P4 386 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 NPTNQ9Y639 398 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 ZFHX2Q9C0A1 2572 aaPredicted RBP4.77□□□□□ -1.65
LINC00348-201ENST00000428761 TRPM7Q96QT4 1865 aa4.77□□□□□ -1.65
LINC00348-201ENST00000428761 EIF3AQ14152 1382 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms