RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SPANXN4Q5MJ08 99 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 ZNF550Q7Z398 422 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 CROCCP2Q86T23 111 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 LILRA2Q8N149 483 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 CHDHQ8NE62 594 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-202ENST00000427943 OR8J2Q8NGG1 315 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 FBXO27Q8NI29 283 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 SLC39A3Q9BRY0 314 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 MED18Q9BUE0 208 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 OR51I1Q9H343 314 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 MEAF6Q9HAF1 191 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 PAQR5Q9NXK6 330 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-202ENST00000427943 PCDHGB4Q9UN71 923 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 EDARQ9UNE0 448 aa16.48■□□□□ 0.23
PSPC1-202ENST00000427943 TMEM120BA0PK00 339 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 C9JVG2 144 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 SIAH2O43255 324 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 EFNA2O43921 213 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 SCN2BO60939 215 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 SS18L1O75177 396 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 SOX30O94993 753 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 ATE1O95260 518 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 UBL4AP11441 157 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 ELK4P28324 431 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 EIF1P41567 113 aaKnown RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 SUMO3P55854 103 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 WDR4P57081 412 aaKnown RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 KEAP1Q14145 624 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 TNFAIP8L2Q6P589 184 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 C16orf62Q7Z3J2 963 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 KIRREL3Q8IZU9 778 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 ATP6V1C2Q8NEY4 427 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 OR6K3Q8NGY3 331 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 TESCQ96BS2 214 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 ZNF524Q96C55 264 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 ZC3HAV1LQ96H79 300 aaKnown RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 GMPPAQ96IJ6 420 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 MARCOQ9UEW3 520 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-202ENST00000427943 FREM1Q5H8C1 2179 aa16.47■□□□□ 0.23
PSPC1-202ENST00000427943 SDHDO14521 159 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 ZNF264O43296 627 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 FCMRO60667 390 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 CYP7B1O75881 506 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 TUBBP07437 444 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 ALDOCP09972 364 aaKnown RBP16.46■□□□□ 0.23
PSPC1-202ENST00000427943 OR12D1P0DN82 309 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 PRKCAP17252 672 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 ZNF239Q16600 458 aaKnown RBP16.46■□□□□ 0.23
PSPC1-202ENST00000427943 FAM174BQ3ZCQ3 159 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 PDSS1Q5T2R2 415 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 ANKRD34AQ69YU3 496 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 GPR119Q8TDV5 335 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 ROBO4Q8WZ75 1007 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 OSTF1Q92882 214 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 RAB8BQ92930 207 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 TEX37Q96LM6 180 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 ALPK1Q96QP1 1244 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 SRXN1Q9BYN0 137 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 KLHL4Q9C0H6 718 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 KCNE5Q9UJ90 142 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 MKLN1Q9UL63 735 aa16.46■□□□□ 0.23
PSPC1-202ENST00000427943 GPC6Q9Y625 555 aaPredicted RBP16.46■□□□□ 0.23
PSPC1-202ENST00000427943 RAI1Q7Z5J4 1906 aaPredicted RBP16.46■□□□□ 0.23
PSPC1-202ENST00000427943 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 PRSS51A0A1B0GVH4 220 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 SERINC4A6NH21 518 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 DUXAA6NLW8 204 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 E9PBE3 544 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 C16orf97H3BN30 126 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 ZNF195O14628 629 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 STX11O75558 287 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 AK1P00568 194 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 C1QCP02747 245 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 KITP10721 976 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 UQCRC2P22695 453 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 PCYT1AP49585 367 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 CLNS1AP54105 237 aaKnown RBP16.45■□□□□ 0.22
PSPC1-202ENST00000427943 CARD18P57730 90 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 UFM1P61960 85 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 CASP8Q14790 479 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 QPRTQ15274 297 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 ARHGAP11BQ3KRB8 267 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 ANXA8L1Q5VT79 327 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 SAXO2Q658L1 398 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 OGFOD2Q6N063 350 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 VPS37AQ8NEZ2 397 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 TOR1AIP2Q8NFQ8 470 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 OR5W2Q8NH69 310 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 MIPOL1Q8TD10 442 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 PIK3IP1Q96FE7 263 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 SLC35A5Q9BS91 424 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 NMUR2Q9GZQ4 415 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 ZNF350Q9GZX5 532 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 C12orf49Q9H741 205 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 COQ10BQ9H8M1 238 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 EXD2Q9NVH0 621 aa16.45■□□□□ 0.22
PSPC1-202ENST00000427943 AIG1Q9NVV5 245 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms