RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 IL10RAQ13651 578 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 NDUFAF6Q330K2 333 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 ZNF770Q6IQ21 691 aaPredicted RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 RPS19BP1Q86WX3 136 aaKnown RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 DTX1Q86Y01 620 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 CADM2Q8N3J6 435 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 OR4K5Q8NGD3 323 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 NR1H4Q96RI1 486 aaPredicted RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 CDCP1Q9H5V8 836 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 ASCL3Q9NQ33 180 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 EXOSC3Q9NQT5 275 aaKnown RBP13.85□□□□□ -0.19
GINS3-203ENST00000426538 PTPRBP23467 1997 aa13.85□□□□□ -0.19
GINS3-203ENST00000426538 HCRTR2O43614 444 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 SCO2O43819 266 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 ADAP00813 363 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 ITGAMP11215 1152 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 CBLP22681 906 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 UGT2B15P54855 530 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 TPD52P55327 224 aaPredicted RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 NPRL3Q12980 569 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 ALG10BQ5I7T1 473 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 ULK3Q6PHR2 472 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 OPN5Q6U736 354 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 MRGPREQ86SM8 312 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 MISPQ8IVT2 679 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 NKAIN4Q8IVV8 208 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 APLFQ8IW19 511 aaPredicted RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 FAM71CQ8NEG0 241 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 GRHL3Q8TE85 626 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 LAT2Q9GZY6 243 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 IL17BQ9UHF5 180 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 AHCTF1Q8WYP5 2266 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 EIF4E2O60573 245 aaKnown RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 ADAM11O75078 769 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 THY1P04216 161 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 FBXO45P0C2W1 286 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 LIPCP11150 499 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 SDHBP21912 280 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 ITPKBP27987 946 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 SLC6A8P48029 635 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 SKP2Q13309 424 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 NTRK2Q16620 822 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 RSPO4Q2I0M5 234 aaPredicted RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 PGBD2Q6P3X8 592 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 CBLN3Q6UW01 205 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 CHERPQ8IWX8 916 aaKnown RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 PIGXQ8TBF5 258 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 SPACA9Q96E40 222 aaPredicted RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 ARSGQ96EG1 525 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 SH3YL1Q96HL8 342 aaPredicted RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 HS6ST2Q96MM7 605 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 NODALQ96S42 347 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 MBOAT4Q96T53 435 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 DGCR6LQ9BY27 220 aa13.84□□□□□ -0.19
GINS3-203ENST00000426538 RYDENQ9NUL5 291 aaKnown RBP13.84□□□□□ -0.19
GINS3-203ENST00000426538 A0A0B4J2E0 115 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 A0A1B0GWA3 101 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 A0A1B0GX12 115 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 TP53I11O14683 189 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 SLC16A6O15403 523 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 CHP2O43745 196 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
GINS3-203ENST00000426538 CLIC3O95833 236 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 NUDT14O95848 222 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 SERPINA7P05543 415 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 GNAO1P09471 354 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 MYF6P23409 242 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 POLR2IP36954 125 aaKnown RBP13.83□□□□□ -0.2
GINS3-203ENST00000426538 IDH2P48735 452 aaKnown RBP13.83□□□□□ -0.2
GINS3-203ENST00000426538 SSR4P51571 173 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 C17orf67Q0P5P2 114 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 COX10Q12887 443 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 TGIF1Q15583 401 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 FCRLBQ6BAA4 426 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 WBP2NLQ6ICG8 309 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 C1orf94Q6P1W5 598 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 MBOAT2Q6ZWT7 520 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 ZER1Q7Z7L7 766 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 RNF113BQ8IZP6 322 aaKnown RBP13.83□□□□□ -0.2
GINS3-203ENST00000426538 TMEM156Q8N614 296 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 ZNF563Q8TA94 476 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 DUSP19Q8WTR2 217 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 TMEM255BQ8WV15 326 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 DNAJA4Q8WW22 397 aaPredicted RBP13.83□□□□□ -0.2
GINS3-203ENST00000426538 ASB15Q8WXK1 588 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 HGDQ93099 445 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 MPP4Q96JB8 637 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 MUS81Q96NY9 551 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 UCK2Q9BZX2 261 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 GRIP2Q9C0E4 1043 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 KLRF1Q9NZS2 232 aa13.83□□□□□ -0.2
GINS3-203ENST00000426538 DCDC2BA2VCK2 349 aa13.82□□□□□ -0.2
GINS3-203ENST00000426538 MASP2O00187 686 aa13.82□□□□□ -0.2
GINS3-203ENST00000426538 SOX3P41225 446 aa13.82□□□□□ -0.2
GINS3-203ENST00000426538 MLF1P58340 268 aa13.82□□□□□ -0.2
GINS3-203ENST00000426538 RPP38P78345 283 aaKnown RBP13.82□□□□□ -0.2
GINS3-203ENST00000426538 ZNF117Q03924 483 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms