RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RPS3AP61247 264 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 SORDQ00796 357 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 OR2A2Q6IF42 318 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 TYW3Q6IPR3 259 aaKnown RBP16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 EPGNQ6UW88 154 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 KIF18BQ86Y91 864 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 OR5W2Q8NH69 310 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 FBXO27Q8NI29 283 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 NRGNQ92686 78 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 ARSGQ96EG1 525 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 OR52E6Q96RD3 313 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 TMEM185BQ9H7F4 350 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 SLCO1B3Q9NPD5 702 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 SDR39U1Q9NRG7 319 aaPredicted RBP16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 RASSF1Q9NS23 344 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 SLC6A13Q9NSD5 602 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 PACSIN3Q9UKS6 424 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 USH1CQ9Y6N9 552 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 DOCK7Q96N67 2140 aa16.45■□□□□ 0.22
SMARCAL1-205ENST00000425815 TUBAL3A6NHL2 446 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 H3BNH8 94 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 ETV2O00321 342 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 HMGN4O00479 90 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 TNFSF11O14788 317 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 MSTNO14793 375 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZNF264O43296 627 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 CXCL13O43927 109 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 EIF4E2O60573 245 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 SLC22A3O75751 556 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 GSNP06396 782 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 EPXP11678 715 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 IDO1P14902 403 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 ADH6P28332 368 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 EIF1P41567 113 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 SUMO3P55854 103 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 FAM27E3Q08E93 113 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 SGCBQ16585 318 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 SLC25A53Q5H9E4 307 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 FRRS1Q6ZNA5 592 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 TMEM200AQ86VY9 491 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 RNF130Q86XS8 419 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 LILRA2Q8N149 483 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZNF614Q8N883 585 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 CNEP1R1Q8N9A8 125 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 GLB1L3Q8NCI6 653 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 OR2V1Q8NHB1 315 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 ROPN1LQ96C74 230 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 C7orf26Q96N11 449 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 PANX1Q96RD7 426 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 GPATCH1Q9BRR8 931 aaKnown RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 LAT2Q9GZY6 243 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 OPN3Q9H1Y3 402 aaPredicted RBP16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 EXD2Q9NVH0 621 aa16.44■□□□□ 0.22
SMARCAL1-205ENST00000425815 A6NNC1 897 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 KIAA0513O60268 411 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 AGR2O95994 175 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 H2AFXP16104 143 aaPredicted RBP16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 PRKCAP17252 672 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 CHI3L1P36222 383 aaPredicted RBP16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 SIRPAP78324 504 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 PLAURQ03405 335 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 CHRNEQ04844 493 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 SKP2Q13309 424 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 TESK1Q15569 626 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 GSTA3Q16772 222 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 COX20Q5RI15 118 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZNF621Q6ZSS3 439 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 ESPNLQ6ZVH7 1005 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 C16orf62Q7Z3J2 963 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 CDH24Q86UP0 819 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 OSTF1Q92882 214 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 DNAJB12Q9NXW2 375 aaKnown RBP16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZIM2Q9NZV7 527 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 STOML1Q9UBI4 398 aa16.43■□□□□ 0.22
SMARCAL1-205ENST00000425815 UBDO15205 165 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 SMNDC1O75940 238 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 IL6P05231 212 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 UBL4AP11441 157 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 PGM1P36871 562 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 MVDP53602 400 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 QPRTQ15274 297 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 MAPK11Q15759 364 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 SYPL1Q16563 259 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 ATAD3BQ5T9A4 648 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 HBMQ6B0K9 141 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 HMGN2P46Q86SG4 172 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZNF610Q8N9Z0 462 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 RFWD2Q8NHY2 731 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 KLHL15Q96M94 604 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 ZBTB18Q99592 522 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 THUMPD3Q9BV44 507 aaKnown RBP16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 SRXN1Q9BYN0 137 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 LIME1Q9H400 295 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 POLE3Q9NRF9 147 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 ITGB1BP2Q9UKP3 347 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 CLEC4AQ9UMR7 237 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 WDR45Q9Y484 360 aa16.42■□□□□ 0.22
SMARCAL1-205ENST00000425815 GPC6Q9Y625 555 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms