RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SNRPGP62308 76 aaKnown RBP13.96□□□□□ -0.17
ACTB-204ENST00000425660 SPEM2Q0P670 501 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 PLCXD2Q0VAA5 305 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 SKP2Q13309 424 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 NCF4Q15080 339 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 DCAF12Q5T6F0 453 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 ULK3Q6PHR2 472 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 MRGPREQ86SM8 312 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 KIF18BQ86Y91 864 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 P3H2Q8IVL5 708 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 CLDN22Q8N7P3 220 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 OMA1Q96E52 524 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 LIN37Q96GY3 246 aaPredicted RBP13.96□□□□□ -0.17
ACTB-204ENST00000425660 HS6ST2Q96MM7 605 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 SIGLEC11Q96RL6 698 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 CCNB1IP1Q9NPC3 277 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 TOR4AQ9NXH8 423 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 IL20Q9NYY1 176 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 B3GALT1Q9Y5Z6 326 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 MUC6Q6W4X9 2439 aa13.96□□□□□ -0.17
ACTB-204ENST00000425660 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 ALG1L2C9J202 215 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 LRP3O75074 770 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 ICOSLGO75144 302 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 REM1O75628 298 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 UBL4AP11441 157 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 JUNBP17275 347 aaPredicted RBP13.95□□□□□ -0.18
ACTB-204ENST00000425660 PRKCDQ05655 676 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 CSRP2Q16527 193 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 ALG10BQ5I7T1 473 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 XAF1Q6GPH4 301 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 FAM199XQ6PEV8 388 aaPredicted RBP13.95□□□□□ -0.18
ACTB-204ENST00000425660 KCTD8Q6ZWB6 473 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 IPCEF1Q8WWN9 437 aaPredicted RBP13.95□□□□□ -0.18
ACTB-204ENST00000425660 MR1Q95460 341 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 NODALQ96S42 347 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 SLC25A19Q9HC21 320 aa13.95□□□□□ -0.18
ACTB-204ENST00000425660 GPN3Q9UHW5 284 aaPredicted RBP13.95□□□□□ -0.18
ACTB-204ENST00000425660 SH3D21A4FU49 640 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 C9J4A7 227 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 PIP5K1CO60331 668 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 UMODP07911 640 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 ETV5P41161 510 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 CTBP2P56545 445 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 SLC26A5P58743 744 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 EFNB1P98172 346 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 NDUFAF6Q330K2 333 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 TMEM201Q5SNT2 666 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 KIRREL2Q6UWL6 708 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 TMPRSS11FQ6ZWK6 438 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 RAB11FIP2Q7L804 512 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 PRR22Q8IZ63 422 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 OR8J1Q8NGP2 316 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
ACTB-204ENST00000425660 DGCR14Q96DF8 476 aaKnown RBP13.94□□□□□ -0.18
ACTB-204ENST00000425660 ARSGQ96EG1 525 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 TUBA1CQ9BQE3 449 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 DDA1Q9BW61 102 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 PLA2G12AQ9BZM1 189 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 POLR1BQ9H9Y6 1135 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 FKBP14Q9NWM8 211 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 RALGAPA1Q6GYQ0 2036 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 C4orf47A7E2U8 309 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 CDC42EP2O14613 210 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 ZNF264O43296 627 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 ENDOUP21128 410 aaKnown RBP13.94□□□□□ -0.18
ACTB-204ENST00000425660 TTKP33981 857 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 GPR4P46093 362 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 SMSP52788 366 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 NRG3P56975 720 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 SLC25A30Q5SVS4 291 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 SLC27A4Q6P1M0 643 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 ZNF620Q6ZNG0 422 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 PTCHD4Q6ZW05 846 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 AMER2Q8N7J2 671 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 ZNF540Q8NDQ6 660 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 OR2Y1Q8NGV0 311 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 GRHL3Q8TE85 626 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 TMIGD2Q96BF3 282 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 CCNL2Q96S94 520 aaPredicted RBP13.94□□□□□ -0.18
ACTB-204ENST00000425660 POLDIP3Q9BY77 421 aaKnown RBP13.94□□□□□ -0.18
ACTB-204ENST00000425660 DSN1Q9H410 356 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 EGLN3Q9H6Z9 239 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 MEPEQ9NQ76 525 aaPredicted RBP13.94□□□□□ -0.18
ACTB-204ENST00000425660 C20orf141Q9NUB4 165 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 PSORS1C1Q9UIG5 152 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 TMEM5Q9Y2B1 443 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 MED31Q9Y3C7 131 aa13.94□□□□□ -0.18
ACTB-204ENST00000425660 A0A1W2PQ72 361 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 CLCA1A8K7I4 914 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 M0R129 80 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 STK17BO94768 372 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 CD63P08962 238 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 PCMT1P22061 227 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 GINS1Q14691 196 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
ACTB-204ENST00000425660 DESI1Q6ICB0 168 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms