RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TMBIM4Q9HC24 238 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 MED17Q9NVC6 651 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 PACSIN3Q9UKS6 424 aa11.44□□□□□ -0.58
SGCE-203ENST00000425444 ROS1P08922 2347 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 TUBAL3A6NHL2 446 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 SDHDO14521 159 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 HDAC3O15379 428 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 WIPF1O43516 503 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 SMPD2O60906 423 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 SMNDC1O75940 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
SGCE-203ENST00000425444 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 IFNA2P01563 188 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 ME2P23368 584 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 EPHA3P29320 983 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 S100A3P33764 101 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 CHI3L1P36222 383 aaPredicted RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 EIF1AXP47813 144 aaKnown RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 SUCLG1P53597 346 aaKnown RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 CLDN15P56746 228 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 EEF1A1P68104 462 aaKnown RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 SIRPAP78324 504 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 ZNF117Q03924 483 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 CASP8Q14790 479 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 PON3Q15166 354 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 PLPPR5Q32ZL2 321 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 FAM174BQ3ZCQ3 159 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 SPANXN4Q5MJ08 99 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 EEF1A1P5Q5VTE0 462 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 NXNQ6DKJ4 435 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 PODNL1Q6PEZ8 512 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 C16orf62Q7Z3J2 963 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 MTERF4Q7Z6M4 381 aaKnown RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 YTHDF3Q7Z739 585 aaKnown RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 WDR75Q8IWA0 830 aaKnown RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 TMCO5AQ8N6Q1 288 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 ACTRT2Q8TDY3 377 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 FIG4Q92562 907 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 TESCQ96BS2 214 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 TLCD1Q96CP7 247 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 RNF145Q96MT1 663 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 ZBTB18Q99592 522 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 PRRG4Q9BZD6 226 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 WDR55Q9H6Y2 383 aaPredicted RBP11.43□□□□□ -0.58
SGCE-203ENST00000425444 TMEM185BQ9H7F4 350 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 MANSC1Q9H8J5 431 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 EXD2Q9NVH0 621 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 AIG1Q9NVV5 245 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 KCNE3Q9Y6H6 103 aa11.43□□□□□ -0.58
SGCE-203ENST00000425444 DOCK7Q96N67 2140 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 PKD1L1Q8TDX9 2849 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 PRSS51A0A1B0GVH4 220 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 A0A1W2PNV4 684 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 SLCO1B7G3V0H7 640 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 GTPBP1O00178 669 aaKnown RBP11.42□□□□□ -0.58
SGCE-203ENST00000425444 SNNO75324 88 aaPredicted RBP11.42□□□□□ -0.58
SGCE-203ENST00000425444 TNFRSF21O75509 655 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 AK1P00568 194 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 CRHP06850 196 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 ALDOCP09972 364 aaKnown RBP11.42□□□□□ -0.58
SGCE-203ENST00000425444 FCGR2AP12318 317 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 UQCRC2P22695 453 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 SLC18A1P54219 525 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 ATP12AP54707 1039 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 CASP9P55211 416 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 SORDQ00796 357 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 FOXF1Q12946 379 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 POU4F3Q15319 338 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 GPR68Q15743 365 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 TMEM44Q2T9K0 475 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 ATAD3BQ5T9A4 648 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 OGFOD2Q6N063 350 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 SPATA19Q7Z5L4 167 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 GGNQ86UU5 652 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 GTPBP8Q8N3Z3 284 aaPredicted RBP11.42□□□□□ -0.58
SGCE-203ENST00000425444 METTL25Q8N6Q8 603 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 RFWD2Q8NHY2 731 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 FNDC9Q8TBE3 224 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 ZNF845Q96IR2 970 aaPredicted RBP11.42□□□□□ -0.58
SGCE-203ENST00000425444 OR51I1Q9H343 314 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 SERHL2Q9H4I8 314 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 JKAMPQ9P055 326 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 CARD8Q9Y2G2 431 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 ZNF175Q9Y473 711 aa11.42□□□□□ -0.58
SGCE-203ENST00000425444 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 C7orf72A4D263 438 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 C9JVG2 144 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 ANKRD28O15084 1053 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 TNFSF13O75888 250 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 SYNGR4O95473 234 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 AGR2O95994 175 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 PLGP00747 810 aaPredicted RBP11.41□□□□□ -0.58
SGCE-203ENST00000425444 OPN1LWP04000 364 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 OR12D1P0DN82 309 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 UBL4AP11441 157 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 KHKP50053 298 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 P2RX1P51575 399 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms