RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CDH15P55291 814 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 SLC37A1P57057 533 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 RNF4P78317 190 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 FUT5Q11128 374 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 DUSP8Q13202 625 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 TUBA3CQ13748 450 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 LARS2Q15031 903 aaKnown RBP14.37□□□□□ -0.11
SHOX2-202ENST00000425436 CYP27C1Q4G0S4 372 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 AP1ARQ63HQ0 302 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 H3F3CQ6NXT2 135 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 JMJD6Q6NYC1 403 aaPredicted RBP14.37□□□□□ -0.11
SHOX2-202ENST00000425436 PCSK4Q6UW60 755 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 PEX5LQ8IYB4 626 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 ZNF615Q8N8J6 731 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 TOR1AIP2Q8NFQ8 470 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 OR52R1Q8NGF1 315 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 ART5Q96L15 291 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 FNDC11Q9BVV2 318 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 CCNB1IP1Q9NPC3 277 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 STMN3Q9NZ72 180 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 SNX5Q9Y5X3 404 aa14.37□□□□□ -0.11
SHOX2-202ENST00000425436 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 TMEM200CA6NKL6 621 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 ERVH48-1M5A8F1 160 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 FFAR1O14842 300 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 MPZL2O60487 215 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 THBS1P07996 1170 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 CBLP22681 906 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 GGT2P36268 569 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 IFNGR2P38484 337 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 CHRNEQ04844 493 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 COX10Q12887 443 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 EIPR1Q53HC9 387 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 ACER2Q5QJU3 275 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 EXOSC6Q5RKV6 272 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 DEF8Q6ZN54 512 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 KCTD8Q6ZWB6 473 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 RPS19BP1Q86WX3 136 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 SLC16A11Q8NCK7 471 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 IPCEF1Q8WWN9 437 aaPredicted RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 SLC9A6Q92581 669 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 PRRC1Q96M27 445 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 POLR2J2Q9GZM3 115 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 RBM38Q9H0Z9 239 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 POLR2J3Q9H1A7 115 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 ANKRD19PQ9H560 264 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 ARMC7Q9H6L4 198 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 PLA2G3Q9NZ20 509 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 TP53TG5Q9Y2B4 290 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 WDR45Q9Y484 360 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 VGLL3A8MV65 326 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 WWP2O00308 870 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 SLC1A7O00341 560 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 STX11O75558 287 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 GANABQ14697 944 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 MAD2L1BPQ15013 274 aaPredicted RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 CTU2Q2VPK5 515 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 AQP11Q8NBQ7 271 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 OR7G1Q8NGA0 311 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 OR52P1PQ8NH57 321 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 C16orf52Q8NHV5 167 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 ZNF420Q8TAQ5 688 aaPredicted RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 GAL3ST4Q96RP7 486 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 SMAD5Q99717 465 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 ARHGDIGQ99819 225 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 DGCR6LQ9BY27 220 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 SAP130Q9H0E3 1048 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 RSL24D1Q9UHA3 163 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 DTX4Q9Y2E6 619 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 PCDHGB1Q9Y5G3 927 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 PCDHGA9Q9Y5G4 932 aaKnown RBP14.36□□□□□ -0.11
SHOX2-202ENST00000425436 KCNE3Q9Y6H6 103 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 CEPT1Q9Y6K0 416 aa14.36□□□□□ -0.11
SHOX2-202ENST00000425436 IGSF10Q6WRI0 2623 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 CNTRLQ7Z7A1 2325 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 CPAMD8Q8IZJ3 1885 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 CYP4B1P13584 511 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 ELAVL4P26378 380 aaKnown RBP14.35□□□□□ -0.11
SHOX2-202ENST00000425436 GSTT1P30711 240 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 EMDP50402 254 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 ZNHIT3Q15649 155 aaPredicted RBP14.35□□□□□ -0.11
SHOX2-202ENST00000425436 ZSWIM7Q19AV6 140 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 FGD3Q5JSP0 725 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 ABHD17BQ5VST6 288 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 ZNF770Q6IQ21 691 aaPredicted RBP14.35□□□□□ -0.11
SHOX2-202ENST00000425436 CD300LDQ6UXZ3 194 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 B3GNT6Q6ZMB0 384 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 SLC29A4Q7RTT9 530 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 P3H2Q8IVL5 708 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 BEST3Q8N1M1 668 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 VANGL1Q8TAA9 524 aaPredicted RBP14.35□□□□□ -0.11
SHOX2-202ENST00000425436 C9orf43Q8TAL5 461 aaPredicted RBP14.35□□□□□ -0.11
SHOX2-202ENST00000425436 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
SHOX2-202ENST00000425436 CDS1Q92903 461 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 NODALQ96S42 347 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 SDF2Q99470 211 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 UCK2Q9BZX2 261 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 ANKRD10Q9NXR5 420 aa14.35□□□□□ -0.11
SHOX2-202ENST00000425436 MYOTQ9UBF9 498 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms