RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 DDX18Q9NVP1 670 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 UVRAGQ9P2Y5 699 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 GMEB2Q9UKD1 530 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 AP3M1Q9Y2T2 418 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 RBMX2Q9Y388 322 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ATP10BO94823 1461 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 PIK3C2AO00443 1686 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 KIF1AQ12756 1690 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CCDC88AQ3V6T2 1871 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ASTN1O14525 1302 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 TOPBP1Q92547 1522 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CARMIL3Q8ND23 1372 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MED1Q15648 1581 aaPredicted RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TAF1LQ8IZX4 1826 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SPEF2Q9C093 1822 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ZCCHC11Q5TAX3 1644 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 PLCH2O75038 1416 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ANKDD1BA6NHY2 528 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SYCE1LA8MT33 242 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 CPLX1O14810 134 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 XPO1O14980 1071 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 PLOD3O60568 738 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 KLHL41O60662 606 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TBX10O75333 385 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ENTPD5O75356 428 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ATP5HO75947 161 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 UFL1O94874 794 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 RETP07949 1114 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 OCM2P0CE71 109 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 OCMP0CE72 109 aaPredicted RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 LBPP18428 481 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 FUT3P21217 361 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 AXLP30530 894 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 LONP1P36776 959 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 RPL5P46777 297 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 NDUFA8P51970 172 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ARHGDIBP52566 201 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 GNG2P59768 71 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MAGOHP61326 146 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ENPEPQ07075 957 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SELENBP1Q13228 472 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SERTAD2Q14140 314 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MAPRE1Q15691 268 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 NADK2Q4G0N4 442 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 CAVIN4Q5BKX8 364 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ACSBG2Q5FVE4 666 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TNFAIP8L3Q5GJ75 292 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SLC10A5Q5PT55 438 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 CCNJQ5T5M9 372 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 NANOGP8Q6NSW7 305 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 IDO2Q6ZQW0 420 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 STOX1Q6ZVD7 989 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 OTOAQ7RTW8 1153 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 NET1Q7Z628 596 aaPredicted RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF410Q86VK4 478 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ANKRD46Q86W74 232 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 RALGPS2Q86X27 583 aaPredicted RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ECHDC2Q86YB7 292 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 UNC5CLQ8IV45 518 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 LAX1Q8IWV1 398 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 IFT20Q8IY31 132 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ALLCQ8N6M5 410 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF433Q8N7K0 673 aaPredicted RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TPRX1Q8N7U7 411 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SPATA4Q8NEY3 305 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 OR4F5Q8NH21 305 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 CDC26Q8NHZ8 85 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SLC22A8Q8TCC7 542 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MAGOHBQ96A72 148 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 NRBF2Q96F24 287 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 CFAP36Q96G28 342 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 RAB40CQ96S21 281 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SECISBP2Q96T21 854 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ECSITQ9BQ95 431 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ST6GALNAC5Q9BVH7 336 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SPZ1Q9BXG8 430 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TBC1D10AQ9BXI6 508 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TXLNGYQ9BZA5 131 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 DDX47Q9H0S4 455 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 HAUS4Q9H6D7 363 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MIEF1Q9NQG6 463 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF331Q9NQX6 463 aaPredicted RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TAS2R7Q9NYW3 318 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 IL37Q9NZH6 218 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 STX18Q9P2W9 335 aaKnown RBP2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SLC7A8Q9UHI5 535 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 FBXL5Q9UKA1 691 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 SNX12Q9UMY4 172 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 ARL2BPQ9Y2Y0 163 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 TMED7Q9Y3B3 224 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MAP3K19Q56UN5 1328 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 WDR19Q8NEZ3 1342 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 MYO3BQ8WXR4 1341 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 BICRAQ9NZM4 1560 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 RFX7Q2KHR2 1363 aa2.61□□□□□ -1.99
LINC01040-201ENST00000425048 FAM208AQ9UK61 1670 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SYCP2Q9BX26 1530 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GPATCH8Q9UKJ3 1502 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8QA0A0J9YX86 632 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8OA6NCC3 632 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms