RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PGRP06401 933 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 DHRS4L1P0CG22 281 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 HPGDP15428 266 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 GGT1P19440 569 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 USF1P22415 310 aaPredicted RBP13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 SHC1P29353 583 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 SFTPDP35247 375 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 FRKP42685 505 aaPredicted RBP13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 EFNA4P52798 201 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 NAA20P61599 178 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 SRSF2Q01130 221 aaKnown RBP13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 SLC22A9Q8IVM8 553 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 FBXL14Q8N1E6 418 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 MUC15Q8N387 334 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 ZFP90Q8TF47 636 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 MRGPRX4Q96LA9 322 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 MS4A4EQ96PG1 132 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 TMEM237Q96Q45 408 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 TSPYL1Q9H0U9 437 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 NINJ2Q9NZG7 142 aa13.74□□□□□ -0.21
RPUSD3-204ENST00000424438 VWC2LB2RUY7 222 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 NDUFS8O00217 210 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 UBFD1O14562 309 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 GMFGO60234 142 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 CYTIPO60759 359 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 RSL1D1O76021 490 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 BMP4P12644 408 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 HNF1AP20823 631 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 ATP5F1P24539 256 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 IGFBP5P24593 272 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 PRIM2P49643 509 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 PRKAA2P54646 552 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 LSM11P83369 360 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 FOXF1Q12946 379 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 SQLEQ14534 574 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 TRADDQ15628 312 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 CNPY4Q8N129 248 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF525Q8N782 197 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 ZFP28Q8NHY6 868 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 PAFAH2Q99487 392 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 KCNF1Q9H3M0 494 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 CXorf36Q9H7Y0 433 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 DUSP22Q9NRW4 184 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 ACSS1Q9NUB1 689 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 KCNS2Q9ULS6 477 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 ICAM5Q9UMF0 924 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 SVEP1Q4LDE5 3571 aa13.73□□□□□ -0.21
RPUSD3-204ENST00000424438 PDPK1O15530 556 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 KCNAB3O43448 404 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 LYZL6O75951 148 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 ACP2P11117 423 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF16P17020 682 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 IGHV1-2P23083 117 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 PRPH2P23942 346 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 P2RX1P51575 399 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 PDK3Q15120 406 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 CD226Q15762 336 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 TMEM176BQ3YBM2 270 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 KLHL17Q6TDP4 642 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 TIFABQ6ZNK6 161 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF551Q7Z340 670 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF572Q7Z3I7 529 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 ZAR1Q86SH2 424 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF433Q8N7K0 673 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 GATSQ8NAP1 163 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 NUP43Q8NFH3 380 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 SH3YL1Q96HL8 342 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 STACQ99469 402 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 KLHDC3Q9BQ90 382 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 HOXD1Q9GZZ0 328 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 EQTNQ9NQ60 294 aa13.72□□□□□ -0.21
RPUSD3-204ENST00000424438 IGKV3D-15A0A087WSY6 115 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 TRIM49D1C9J1S8 452 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 SNRPAP09012 282 aaKnown RBP13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 ENPP1P22413 925 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 CD40P25942 277 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF117Q03924 483 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 CHRNB3Q05901 458 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 BTKQ06187 659 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 C2orf54Q08AI8 447 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 RASGEF1BQ0VAM2 473 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 STK11Q15831 433 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 DUSP5Q16690 384 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 KLHL26Q53HC5 615 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 NOXRED1Q6NXP6 359 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 C12orf54Q6X4T0 127 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 DEPDC4Q8N2C3 294 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF527Q8NB42 609 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 FBXO27Q8NI29 283 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 ARL8AQ96BM9 186 aa13.71□□□□□ -0.21
RPUSD3-204ENST00000424438 BTBD2Q9BX70 525 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms