RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TMEM176BQ3YBM2 270 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 KPRPQ5T749 579 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 SAMD5Q5TGI4 173 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 REP15Q6BDI9 236 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 FIP1L1Q6UN15 594 aaKnown RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ADAMTSL2Q86TH1 951 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 WDFY1Q8IWB7 410 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 RIBC1Q8N443 379 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 TMCO5AQ8N6Q1 288 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 GATSQ8NAP1 163 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 OR7G3Q8NG95 312 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 OR4N2Q8NGD1 307 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 CEP70Q8NHQ1 597 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 HUS1BQ8NHY5 278 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 C1orf54Q8WWF1 131 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 JADE3Q92613 823 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ALG3Q92685 438 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 RDH5Q92781 318 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ESAMQ96AP7 390 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 MRRFQ96E11 262 aaKnown RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 SLC47A1Q96FL8 570 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ARL5BQ96KC2 179 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 C1orf147Q96MC9 270 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ANKRD27Q96NW4 1050 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF300Q96RE9 604 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 PSD2Q9BQI7 771 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF416Q9BWM5 594 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 FRMD8P1Q9BZ68 369 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ANKRA2Q9H9E1 313 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF275Q9NSD4 429 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 FAM120CQ9NX05 1096 aaKnown RBP5.46□□□□□ -1.54
SDCBP-203ENST00000424270 PLEK2Q9NYT0 353 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 CD274Q9NZQ7 290 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 FLRT3Q9NZU0 649 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 PSME2Q9UL46 239 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 ANGPTL3Q9Y5C1 460 aa5.46□□□□□ -1.54
SDCBP-203ENST00000424270 IGHV3OR16-10A0A075B7F0 116 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 A0A0A6YYD5 115 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 A0A1W2PRB8 838 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TCRBV7S2A1N4TA0A589 114 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 C5orf63A6NC05 138 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 OR6C65A6NJZ3 312 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 SDR42E2A6NKP2 422 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 DHHO43323 396 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 HOXA3O43365 443 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 RGS14O43566 566 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 FADS1O60427 444 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 GUCY1B2O75343 617 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 MRPL33O75394 65 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 ATP1B1P05026 303 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TPM3P06753 285 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CCDC175P0C221 793 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CT45A8P0DMV1 189 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CT45A9P0DMV2 189 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 COL8A2P25067 703 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 EDNRAP25101 427 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 SHC1P29353 583 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 GGT5P36269 586 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CASP2P42575 452 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 HADHBP55084 474 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 MANFP55145 182 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TMEM33P57088 247 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 GPX6P59796 221 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 UBE2NP61088 152 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 LMO4P61968 165 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TIAL1Q01085 375 aaKnown RBP eCLIP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 COL10A1Q03692 680 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 SPA17Q15506 151 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TMEM44Q2T9K0 475 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 NRN1LQ496H8 165 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 SLC9B1Q4ZJI4 515 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CT45A2Q5DJT8 189 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CCNYL2Q5T2Q4 361 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 FAM45BPQ6NSW5 357 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 FAM180BQ6P0A1 224 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 C4orf22Q6V702 233 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 NPSR1Q6W5P4 371 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TRIM46Q7Z4K8 759 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TRABD2AQ86V40 505 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 JAZF1Q86VZ6 243 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CDK20Q8IZL9 346 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 NKAPQ8N5F7 415 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 OR4F15Q8NGB8 312 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 FAM45AQ8TCE6 357 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 ST7LQ8TDW4 575 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 ZFP90Q8TF47 636 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 POP5Q969H6 163 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 RBMXL1Q96E39 390 aaKnown RBP5.45□□□□□ -1.54
SDCBP-203ENST00000424270 SLC38A2Q96QD8 506 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 CHP1Q99653 195 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 OCSTAMPQ9BR26 566 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 MRI1Q9BV20 369 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 BCO1Q9HAY6 547 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 HHATLQ9HCP6 504 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 SLC17A5Q9NRA2 495 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 MED17Q9NVC6 651 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TAS2R9Q9NYW1 312 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 REV1Q9UBZ9 1251 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 UTS2RQ9UKP6 389 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms