RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 ASIC5Q9NY37 505 aa11.11□□□□□ -0.63
NCKIPSD-203ENST00000415281 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 NPIPB9F8W1W9 429 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 KCNH1O95259 989 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 NTN1O95631 604 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 EIF1AXP47813 144 aaKnown RBP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 PRIM2P49643 509 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 RNF144AP50876 292 aaPredicted RBP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 MLC1Q15049 377 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZNHIT3Q15649 155 aaPredicted RBP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 TOMM34Q15785 309 aaPredicted RBP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 Q5PR19 223 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 EPGNQ6UW88 154 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 CHMP1BQ7LBR1 199 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 SZRD1Q7Z422 152 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 CEP70Q8NHQ1 597 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 PSMA8Q8TAA3 256 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 ACTRT2Q8TDY3 377 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 COQ8BQ96D53 544 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZC3HAV1LQ96H79 300 aaKnown RBP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 RNF145Q96MT1 663 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 DUSP26Q9BV47 211 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 TBL1XR1Q9BZK7 514 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 MED4Q9NPJ6 270 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 ATAD3AQ9NVI7 634 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 PROCRQ9UNN8 238 aa11.1□□□□□ -0.63
NCKIPSD-203ENST00000415281 NPIPA5A0A0B4J1W7 369 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 A0A1W2PQD3 144 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 TRIM64BA6NI03 449 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 NPIPA7E9PJI5 369 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 CFLARO15519 480 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 NDUFB5O43674 189 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 HMGN2P05204 90 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 NPIPA8P0DM63 369 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZNF17P17021 662 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 DDX5P17844 614 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 CLK3P49761 638 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 PSMD4P55036 377 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 AQP5P55064 265 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 UFM1P61960 85 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 RAC1P63000 192 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 ZNF117Q03924 483 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 LSM12Q3MHD2 195 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 KLHL26Q53HC5 615 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 OR4F3Q6IEY1 312 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 OGFOD2Q6N063 350 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 NUFIP2Q7Z417 695 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 PRIMA1Q86XR5 153 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 LRRC34Q8IZ02 419 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 ARFGAP2Q8N6H7 521 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 OR6K3Q8NGY3 331 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 CDS1Q92903 461 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 SH3YL1Q96HL8 342 aaPredicted RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 SLC39A3Q9BRY0 314 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 MED18Q9BUE0 208 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 KLHL4Q9C0H6 718 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 BHLHE41Q9C0J9 482 aaPredicted RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 CXorf36Q9H7Y0 433 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 C3orf14Q9HBI5 128 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 UBQLN4Q9NRR5 601 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 GPATCH2Q9NW75 528 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 KCNE5Q9UJ90 142 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 ICAM5Q9UMF0 924 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 SNX8Q9Y5X2 465 aa11.09□□□□□ -0.63
NCKIPSD-203ENST00000415281 A0A087WZY1 265 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 C9JVG2 144 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 H7C1Q1 480 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 TNFSF11O14788 317 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 ANKRD28O15084 1053 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 UBDO15205 165 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 GCM2O75603 506 aaPredicted RBP11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 C6orf47O95873 294 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 HEXAP06865 529 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 PAX1P15863 534 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 EDNRAP25101 427 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 IDH3AP50213 366 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 RPS3AP61247 264 aaKnown RBP11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 GUCY1A3Q02108 690 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 SGCBQ16585 318 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 EXOC3L2Q2M3D2 409 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 NDUFAF6Q330K2 333 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 ZCCHC12Q6PEW1 402 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 CLEC9AQ6UXN8 241 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 ATG4DQ86TL0 474 aaPredicted RBP11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 GABRG1Q8N1C3 465 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 OR2V1Q8NHB1 315 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 OR5P2Q8WZ92 322 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 OSTF1Q92882 214 aa11.08□□□□□ -0.64
NCKIPSD-203ENST00000415281 PIGTQ969N2 578 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms