RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LRRC20Q8TCA0 184 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 TOP1MTQ969P6 601 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 SDSLQ96GA7 329 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 NKX3-1Q99801 234 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-204ENST00000412061 FEM1AQ9BSK4 669 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 ANKRD19PQ9H560 264 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 CCNB1IP1Q9NPC3 277 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 INTS9Q9NV88 658 aaKnown RBP3.86□□□□□ -1.79
BRCA1-204ENST00000412061 TAAR2Q9P1P5 351 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 EIF3KQ9UBQ5 218 aaKnown RBP3.86□□□□□ -1.79
BRCA1-204ENST00000412061 CYTH4Q9UIA0 394 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 TCF19Q9Y242 345 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 RASD1Q9Y272 281 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 DHRS7Q9Y394 339 aa3.86□□□□□ -1.79
BRCA1-204ENST00000412061 EXOSC1Q9Y3B2 195 aaKnown RBP3.86□□□□□ -1.79
BRCA1-204ENST00000412061 FRG2CA6NGY1 282 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 HIP1O00291 1037 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 PRKAB2O43741 272 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 DUSP11O75319 330 aaKnown RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 KHDRBS3O75525 346 aaKnown RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 P04436 131 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 SERPIND1P05546 499 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 GPIP06744 558 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 HBQ1P09105 142 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 UMPSP11172 480 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 GCAP28676 217 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 GNA11P29992 359 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 SAA4P35542 130 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 GPR4P46093 362 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 HLCSP50747 726 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 MAP3K7CLP57077 242 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 PAX5Q02548 391 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 ITIH4Q14624 930 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 STK38Q15208 465 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 PPP1R3AQ16821 1122 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 SLC25A52Q3SY17 297 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 HSP90AA4PQ58FG1 418 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 BEX5Q5H9J7 111 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 PAQR6Q6TCH4 344 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 APTXQ7Z2E3 356 aaKnown RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 TSEN54Q7Z6J9 526 aaKnown RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 CD302Q8IX05 232 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 SLC35F2Q8IXU6 374 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 SLC22A15Q8IZD6 547 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 LINC01561Q8N1V8 128 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 OR4D10Q8NGI6 311 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 RPLP0P6Q8NHW5 317 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 MAGEE2Q8TD90 523 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 DTX3LQ8TDB6 740 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 HPSE2Q8WWQ2 592 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 CERS2Q96G23 380 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF578Q96N58 590 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 KCNS3Q9BQ31 491 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 OVOL2Q9BRP0 275 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 RBM4Q9BWF3 364 aaKnown RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 ILKAPQ9H0C8 392 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-204ENST00000412061 PLEKHA3Q9HB20 300 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 ZDHHC18Q9NUE0 388 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 CHMP5Q9NZZ3 219 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 SNED1Q8TER0 1413 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 NEURL4Q96JN8 1562 aa3.85□□□□□ -1.79
BRCA1-204ENST00000412061 NPIPA5A0A0B4J1W7 369 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 A0A1B0GUH1 482 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 SERPINE3A8MV23 424 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 NPIPA5E9PKD4 350 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 TRAFD1O14545 582 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 RAMP3O60896 148 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 SH3BGRLO75368 114 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ATP5LO75964 103 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 SEC24AO95486 1093 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 FGFR1OPO95684 399 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 NGFP01138 241 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 CRYAAP02489 173 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 IGHV4-38-2P0DP08 117 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 KITLGP21583 273 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 MARK3P27448 753 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 YWHABP31946 246 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 MAGEA9P43362 315 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ZFP36L2P47974 494 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 XGP55808 180 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 KLRB1Q12918 225 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 COTL1Q14019 142 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 EIF2B1Q14232 305 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 GPR176Q14439 515 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 P2RY6Q15077 328 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 RAB35Q15286 201 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 SLC5A12Q1EHB4 618 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 KLHL38Q2WGJ6 581 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF672Q499Z4 452 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 GLYR1Q49A26 553 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 CYBRD1Q53TN4 286 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 PRR5LQ6MZQ0 368 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 TTC23LQ6PF05 361 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 SLC25A47Q6Q0C1 308 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ENPP6Q6UWR7 440 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ZNF771Q7L3S4 317 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ERI1Q8IV48 349 aaKnown RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 FAM58AQ8N1B3 248 aa3.84□□□□□ -1.79
BRCA1-204ENST00000412061 ZSCAN4Q8NAM6 433 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-204ENST00000412061 OR5T3Q8NGG3 340 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms