RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLITRK5O94991 958 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 CRABP1P29762 137 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TNFRSF4P43489 277 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC6A8P48029 635 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SOX9P48436 509 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PRPS1P60891 318 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 AKR1C1Q04828 323 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 UBAC2Q8NBM4 344 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 RNF38Q9H0F5 515 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC7A8Q9UHI5 535 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 A0A0A6YYC8 382 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 I3L1I5 382 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TPOP07202 933 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ACPPP15309 386 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TGM4P49221 684 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PIGFQ07326 219 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 FAM57BQ71RH2 274 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 CMIPQ8IY22 773 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SAMD8Q96LT4 415 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 MACROD1Q9BQ69 325 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 DPCDQ9BVM2 203 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PRSS38A1L453 326 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TUBA1BP68363 451 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TUBA4AP68366 448 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TUBA1AQ71U36 451 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 METTL4Q8N3J2 472 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 OR6C4Q8NGE1 309 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ARL6Q9H0F7 186 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SLCO3A1Q9UIG8 710 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 WASH4PA8MWX3 477 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ZFAND5O76080 213 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 FAM163BP0C2L3 166 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 LCN10Q6JVE6 187 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF529Q6P280 563 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ZDHHC24Q6UX98 284 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 RNF128Q8TEB7 428 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC19A3Q9BZV2 496 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 RDH14Q9HBH5 336 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF286AQ9HBT8 521 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 FAM96BQ9Y3D0 163 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ACTL7AQ9Y615 435 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 COL1A1P02452 1464 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TOPAZ1Q8N9V7 1692 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SCN8AQ9UQD0 1980 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 FAM159BA6NKW6 160 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PCDH17O14917 1159 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TP53P04637 393 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 LIPCP11150 499 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ARSBP15848 533 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 HLA-FP30511 346 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 NKX6-1P78426 367 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ACSM3Q53FZ2 586 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 FAM217AQ8IXS0 508 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 IQCKQ8N0W5 287 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TEX26Q8N6G2 289 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 OR5D16Q8NGK9 328 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 CNOT9Q92600 299 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 MS4A4EQ96PG1 132 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 CDCA3Q99618 268 aaPredicted RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 RALGAPA1Q6GYQ0 2036 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 SHISA7A6NL88 538 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC31A2O15432 143 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 CLIC3O95833 236 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 FBXO45P0C2W1 286 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 OR1D4P47884 311 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 EDDM3AQ14507 147 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 GLIS1Q8NBF1 620 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 PCYT2Q99447 389 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 LINC00597Q9H2U6 94 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 RETREG1Q9H6L5 497 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 ACKR4Q9NPB9 350 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 OLAHQ9NV23 265 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 SIX4Q9UIU6 781 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 DNASE1P24855 282 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 SSR4P51571 173 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 IRF4Q15306 451 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 VWA5B2Q8N398 1253 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 OR52R1Q8NGF1 315 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 C14orf119Q9NWQ9 140 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 ATP23Q9Y6H3 246 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 AQP12BA6NM10 295 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 PIRO00625 290 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 AGPAT2O15120 278 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 DOK2O60496 412 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 KDELR2P33947 212 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 GPX6P59796 221 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 GALNT2Q10471 571 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 CYP1B1Q16678 543 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 C18orf21Q32NC0 220 aaPredicted RBP10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF679Q8IYX0 411 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 MMP21Q8N119 569 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 CHST14Q8NCH0 376 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 TMEM104Q8NE00 496 aa10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 DDX1Q92499 740 aaKnown RBP10.57□□□□□ -0.72
PRPF40A-202ENST00000410080 C16orf70Q9BSU1 422 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms