RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TMEM50AO95807 157 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 NGFP01138 241 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 SERPIND1P05546 499 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 KITLGP21583 273 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 EDNRAP25101 427 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 STOMP27105 288 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 GNA11P29992 359 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 RPL9P32969 192 aaKnown RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 PDLIM4P50479 330 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 SLC8A3P57103 927 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 RPS6P62753 249 aaKnown RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 CSNK2BP67870 215 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CDK16Q00536 496 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 IRF8Q02556 426 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 PPIL2Q13356 520 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 EMC2Q15006 297 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 RBBP5Q15291 538 aaKnown RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 CD226Q15762 336 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CCDC6Q16204 474 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ZNF829Q3KNS6 432 aaPredicted RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 C1orf220Q5T0J3 134 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ZNF772Q68DY9 489 aaPredicted RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 SLC25A25Q6KCM7 469 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 FAHD2BQ6P2I3 314 aaPredicted RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 ZNF790Q6PG37 636 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 HSDL2Q6YN16 418 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 STXBP4Q6ZWJ1 553 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CREB3L2Q70SY1 520 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 RBM23Q86U06 439 aaKnown RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 TPRA1Q86W33 373 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ERI1Q8IV48 349 aaKnown RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 FAM58AQ8N1B3 248 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 C15orf54Q8N8G6 183 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ASCC1Q8N9N2 400 aaKnown RBP4.18□□□□□ -1.74
LSM5-205ENST00000409952 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ASZ1Q8WWH4 475 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 BIRC7Q96CA5 298 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 FAHD2AQ96GK7 314 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 ZNF479Q96JC4 524 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 SERAC1Q96JX3 654 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 FAM218AQ96MZ4 157 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 MBOAT4Q96T53 435 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 P2RY13Q9BPV8 354 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 POPDC2Q9HBU9 364 aa4.18□□□□□ -1.74
LSM5-205ENST00000409952 CKAP5Q14008 2032 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 IQCMA0A1B0GVH7 501 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 MSGN1A6NI15 193 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 H3BNX3 289 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 BCKDKO14874 412 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 RAMP1O60894 148 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 AP2A1O95782 977 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 TOMM40O96008 361 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 IGHG4P01861 327 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 IGFBP1P08833 259 aaPredicted RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 HOXB7P09629 217 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ZNF24P17028 368 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 GCAP28676 217 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 HMOX2P30519 316 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 RRM2P31350 389 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 CD80P33681 288 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 RPL4P36578 427 aaKnown RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 CCNG1P51959 295 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 CRYBA2P53672 197 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 MAP3K7CLP57077 242 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 PLOD1Q02809 727 aaPredicted RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 GUCY2DQ02846 1103 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ZNF85Q03923 595 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ZFP36L1Q07352 338 aaKnown RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 RAB40BQ12829 278 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 SLAQ13239 276 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ITIH4Q14624 930 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 TWIST1Q15672 202 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 VPS26BQ4G0F5 336 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 TMEM52BQ4KMG9 183 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 DCST2Q5T1A1 773 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 WSCD1Q658N2 575 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 CAPRIN2Q6IMN6 1127 aaKnown RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 ERICH5Q6P6B1 374 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 MARCH9Q86YJ5 346 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ZNF596Q8TC21 504 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 SECTM1Q8WVN6 248 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 SORCS1Q8WY21 1168 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 UBE2E3Q969T4 207 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 NTNG2Q96CW9 530 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 CERS2Q96G23 380 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ZNF354BQ96LW1 612 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 PAIP2Q9BPZ3 127 aaKnown RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 ROGDIQ9GZN7 287 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 SPACA1Q9HBV2 294 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 CCNB1IP1Q9NPC3 277 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 SIX2Q9NPC8 291 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 ZDHHC18Q9NUE0 388 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 CHMP5Q9NZZ3 219 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 STOX2Q9P2F5 926 aaPredicted RBP4.17□□□□□ -1.74
LSM5-205ENST00000409952 CIDEBQ9UHD4 219 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 SCML2Q9UQR0 700 aa4.17□□□□□ -1.74
LSM5-205ENST00000409952 K7ERI5 159 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 LATO43561 262 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms