RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ABCD4O14678 606 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 KLF11O14901 512 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 YY2O15391 372 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 OGG1O15527 345 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 NOS1APO75052 506 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 BCAS1O75363 584 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SRP72O76094 671 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 GLCEO94923 617 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SLC25A14O95258 325 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SNAP29O95721 258 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CPNE6O95741 557 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LDOC1O95751 146 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 EML2O95834 649 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PTTG1O95997 202 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ADAP00813 363 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TNFP01375 233 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 IL6P05231 212 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 HOXD4P09016 255 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 HOXC4P09017 264 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CALCBP10092 127 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 G6PDP11413 515 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CEACAM1P13688 526 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PKMP14618 531 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 RAB3AP20336 220 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 NR4A1P22736 598 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TEAD1P28347 426 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 IL12AP29459 219 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CD40LGP29965 261 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PPIFP30405 207 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TIA1P31483 386 aaKnown RBP eCLIP4.23□□□□□ -1.732e-10■■■■■ 34.9
SF3B1-202ENST00000409915 NUP62P37198 522 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ACTR1BP42025 376 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 BLKP51451 505 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CTSCP53634 463 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 MAPK12P53778 367 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ITGA1P56199 1179 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 MAZP56270 477 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 GPX6P59796 221 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TSPAN5P62079 268 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ADORA2A-AS1P86434 159 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CDH17Q12864 832 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ILF3Q12906 894 aaKnown RBP eCLIP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PEX6Q13608 980 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 FASTKD3Q14CZ7 662 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LARS2Q15031 903 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ELOCQ15369 112 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PYCR3Q53H96 274 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ZMAT1Q5H9K5 638 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LDLRAP1Q5SW96 308 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 GPRC6AQ5T6X5 926 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 C1orf146Q5VVC0 180 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 UBE2UQ5VVX9 321 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 AGAP6Q5VW22 663 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ACSM6Q6P461 480 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 GUSBP11Q6P575 273 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TEX38Q6PEX7 206 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PAQR3Q6TCH7 311 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 DHRS13Q6UX07 377 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 IL20RBQ6UXL0 311 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TMPRSS9Q7Z410 1059 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 AMIGO2Q86SJ2 522 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF605Q86T29 641 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LINC00523Q86TU6 105 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 RTN4RL2Q86UN3 420 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 NRROSQ86YC3 692 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PLCZ1Q86YW0 608 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TRAPPC5Q8IUR0 188 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PIANPQ8IYJ0 282 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 EID3Q8N140 333 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PARP8Q8N3A8 854 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 FBXO39Q8N4B4 442 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 Q8N9G6 341 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 BHLHE23Q8NDY6 225 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 OR56B1Q8NGI3 324 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 OR13J1Q8NGT2 312 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 OR4C6Q8NH72 309 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 VANGL1Q8TAA9 524 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LRRC20Q8TCA0 184 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 FIG4Q92562 907 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 NSMAFQ92636 917 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SLCO2A1Q92959 643 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ART4Q93070 314 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 LIN37Q96GY3 246 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 AGAP4Q96P64 663 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PPP1R2P1Q96PQ5 205 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SERPINI1Q99574 410 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM246Q9BRR3 403 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PELOQ9BRX2 385 aaKnown RBP4.23□□□□□ -1.73
SF3B1-202ENST00000409915 OSBPL11Q9BXB4 747 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ANKRD60Q9BZ19 345 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 PPA2Q9H2U2 334 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TRABDQ9H4I3 376 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ASB8Q9H765 288 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SYNDIG1Q9H7V2 258 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 EVA1AQ9H8M9 152 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TNFRSF12AQ9NP84 129 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 COA4Q9NYJ1 87 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 NLGN3Q9NZ94 848 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 GLTPQ9NZD2 209 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TAAR2Q9P1P5 351 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms