RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 HNRNPCL4P0DMR1 293 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 COX4I1P13073 169 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 CLDN18P56856 261 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 TOMM34Q15785 309 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 RAET1LQ5VY80 246 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 AAGABQ6PD74 315 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 PTOV1Q86YD1 416 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 GTPBP8Q8N3Z3 284 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 METTL25Q8N6Q8 603 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 OR5W2Q8NH69 310 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 CCT8L2Q96SF2 557 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 RSPO3Q9BXY4 272 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 KAT8Q9H7Z6 458 aaKnown RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-203ENST00000409783 SLC35A3Q9Y2D2 325 aa20.22■□□□□ 0.83
PTCD3-203ENST00000409783 KDM4EB2RXH2 506 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ETV2O00321 342 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 PGM3O95394 542 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 DBIP07108 87 aaKnown RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 UBTFL6P0CB48 400 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ESRRAP11474 423 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 NID1P14543 1247 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ZNF708P17019 499 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ZNF17P17021 662 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 GCKP35557 465 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 GZMMP51124 257 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 PER3P56645 1201 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 CLDN15P56746 228 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 GNA13Q14344 377 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 MMEL1Q495T6 779 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ENPP6Q6UWR7 440 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 NET1Q7Z628 596 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 CMIPQ8IY22 773 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 PM20D2Q8IYS1 436 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 NFKBIDQ8NI38 313 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 WDR60Q8WVS4 1066 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 CNOT9Q92600 299 aaKnown RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ZBTB8AQ96BR9 441 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 RCN3Q96D15 328 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 PIGQQ9BRB3 760 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 THUMPD3Q9BV44 507 aaKnown RBP20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ADAM21Q9UKJ8 722 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 ARL2BPQ9Y2Y0 163 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 CHST2Q9Y4C5 530 aa20.21■□□□□ 0.83
PTCD3-203ENST00000409783 TMEM247A6NEH6 219 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 AHRRA9YTQ3 701 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 LINC01387J3KSC0 135 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 ADAM11O75078 769 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 NTN1O95631 604 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 HOXD4P09016 255 aaPredicted RBP20.2■□□□□ 0.82
PTCD3-203ENST00000409783 GABRA1P14867 456 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 ZNF41P51814 821 aaPredicted RBP20.2■□□□□ 0.82
PTCD3-203ENST00000409783 CDK6Q00534 326 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 BCL2A1Q16548 175 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 RABL3Q5HYI8 236 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 C1orf185Q5T7R7 199 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 MTFR2Q6P444 385 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 SEM1Q6ZVN7 128 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 VRK2Q86Y07 508 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 PEX5LQ8IYB4 626 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 EID3Q8N140 333 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 OR52P1PQ8NH57 321 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 BBS10Q8TAM1 723 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 TTYH2Q9BSA4 534 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 EXOSC3Q9NQT5 275 aaKnown RBP20.2■□□□□ 0.82
PTCD3-203ENST00000409783 DNAJB12Q9NXW2 375 aaKnown RBP20.2■□□□□ 0.82
PTCD3-203ENST00000409783 ALKBH4Q9NXW9 302 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 CAMK2AQ9UQM7 478 aa20.2■□□□□ 0.82
PTCD3-203ENST00000409783 PEPDP12955 493 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 IL7RP16871 459 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 PRKCAP17252 672 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 PTGER4P35408 488 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 NUP107P57740 925 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 EEF1A1P68104 462 aaKnown RBP20.19■□□□□ 0.82
PTCD3-203ENST00000409783 ACSF3Q4G176 576 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-203ENST00000409783 SLC25A53Q5H9E4 307 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 MRPL2Q5T653 305 aaKnown RBP20.19■□□□□ 0.82
PTCD3-203ENST00000409783 REEP3Q6NUK4 255 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 ZNF836Q6ZNA1 936 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 ADGRE4PQ86SQ3 457 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 TMCO5AQ8N6Q1 288 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 PCYOX1LQ8NBM8 494 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 OR8J3Q8NGG0 315 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 ITLN2Q8WWU7 325 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-203ENST00000409783 RNF145Q96MT1 663 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 ZNF443Q9Y2A4 671 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-203ENST00000409783 COL12A1Q99715 3063 aa20.19■□□□□ 0.82
PTCD3-203ENST00000409783 USP9YO00507 2555 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-203ENST00000409783 EFNA2O43921 213 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 CYP7B1O75881 506 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 NUDT14O95848 222 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 EPPINO95925 133 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 THBS1P07996 1170 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 GLI4P10075 376 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 ETS2P15036 469 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 SLC6A2P23975 617 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 CCR4P51679 360 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 SUCLG1P53597 346 aaKnown RBP20.18■□□□□ 0.82
PTCD3-203ENST00000409783 DLX5P56178 289 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 FOXF1Q12946 379 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms