RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SFTPDP35247 375 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 ASMTP46597 345 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 PRIM2P49643 509 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF844Q08AG5 666 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 TNK1Q13470 666 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 MLC1Q15049 377 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 RNPS1Q15287 305 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 CD226Q15762 336 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 KRTAP24-1Q3LI83 254 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 TMEM201Q5SNT2 666 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 CCNJQ5T5M9 372 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 LIPMQ5VYY2 423 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 ALKBH2Q6NS38 261 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 ADAM5Q6NVV9 412 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 LRIG3Q6UXM1 1119 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 RNF165Q6ZSG1 346 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 NUFIP2Q7Z417 695 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 R3HCC1LQ7Z5L2 792 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 TUSC5Q8IXB3 177 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 LILRB1Q8NHL6 650 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 CLHC1Q8NHS4 586 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 RAB3IL1Q8TBN0 382 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 HSD17B8Q92506 261 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 S100PBPQ96BU1 408 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 MTERF3Q96E29 417 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 FAM120BQ96EK7 910 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 OTUB1Q96FW1 271 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 STACQ99469 402 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 TACO1Q9BSH4 297 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 C12orf65Q9H3J6 166 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 TUBB1Q9H4B7 451 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 TMED5Q9Y3A6 229 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 FIS1Q9Y3D6 152 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 SNX8Q9Y5X2 465 aa8.16□□□□□ -1.1
NIF3L1-203ENST00000409129 GJE1A6NN92 205 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 OVOL3O00110 214 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 COPEO14579 308 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF195O14628 629 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 LSM1O15116 133 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 PRKD3O94806 890 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 SOX30O94993 753 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 NTN1O95631 604 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 CHEK2O96017 543 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 SHBGP04278 402 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 HMGN2P05204 90 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 BCKDHAP12694 445 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 DDX5P17844 614 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ELK4P28324 431 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 P2RX1P51575 399 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 RPS4XP62701 263 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 RPL38P63173 70 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 RELBQ01201 579 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF117Q03924 483 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 FOXF1Q12946 379 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 TSC22D1Q15714 1073 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ZNF239Q16600 458 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 CLEC12BQ2HXU8 276 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 TMEM176BQ3YBM2 270 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 GALNTL6Q49A17 601 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 KLHL26Q53HC5 615 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 NCMAPQ5T1S8 102 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 SFRP5Q5T4F7 317 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 KANK2Q63ZY3 851 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 PODNL1Q6PEZ8 512 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 TFAP2EQ6VUC0 442 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 C10orf107Q8IVU9 208 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 GABRG1Q8N1C3 465 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 FBXO27Q8NI29 283 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 PHOSPHO1Q8TCT1 267 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 RNF128Q8TEB7 428 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ABHD3Q8WU67 409 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 JADE3Q92613 823 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 CDS1Q92903 461 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 CPNE4Q96A23 557 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 TRMT61AQ96FX7 289 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 CHMP6Q96FZ7 201 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 RHOXF2Q9BQY4 288 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 TRMOQ9BU70 441 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 GATA5Q9BWX5 397 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 SRXN1Q9BYN0 137 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 HOXD1Q9GZZ0 328 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 PIGUQ9H490 435 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ESRP2Q9H6T0 727 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 GP6Q9HCN6 339 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 NGBQ9NPG2 151 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 DUSP22Q9NRW4 184 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 SIRT3Q9NTG7 399 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ZCCHC3Q9NUD5 404 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 GIN1Q9NXP7 522 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 KLHL13Q9P2N7 655 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ATP6V1HQ9UI12 483 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 RNF115Q9Y4L5 304 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 DNAJC15Q9Y5T4 150 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
NIF3L1-203ENST00000409129 H3BNH8 94 aa8.14□□□□□ -1.11
NIF3L1-203ENST00000409129 GTPBP1O00178 669 aaKnown RBP8.14□□□□□ -1.11
NIF3L1-203ENST00000409129 CLOCKO15516 846 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms