RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TBC1D19Q8N5T2 526 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 CLDN22Q8N7P3 220 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 KIAA1958Q8N8K9 716 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 OR4N2Q8NGD1 307 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 GHSRQ92847 366 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 C3orf49Q96BT1 292 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 NEURL3Q96EH8 262 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 RNF170Q96K19 258 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 HSPA12BQ96MM6 686 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 NDC1Q9BTX1 674 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 SIRT3Q9NTG7 399 aaPredicted RBP7.76□□□□□ -1.17
SNX13-201ENST00000409076 TMEM74BQ9NUR3 256 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 IER3IP1Q9Y5U9 82 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 CEP250Q9BV73 2442 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 SGK494L7N484 410 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 QSOX1O00391 747 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 TEAD1P28347 426 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 CSNK1G2P78368 415 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 CDK3Q00526 305 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 CLPPQ16740 277 aaPredicted RBP7.76□□□□□ -1.17
SNX13-201ENST00000409076 MRPL2Q5T653 305 aaKnown RBP7.76□□□□□ -1.17
SNX13-201ENST00000409076 TEX19Q8NA77 164 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 OR7G2Q8NG99 324 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 HAVCR2Q8TDQ0 301 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 THEM6Q8WUY1 208 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 RFKQ969G6 155 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 CAMK1GQ96NX5 476 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 TSPAN10Q9H1Z9 355 aaPredicted RBP7.76□□□□□ -1.17
SNX13-201ENST00000409076 C12orf4Q9NQ89 552 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 RBFOX1Q9NWB1 397 aaKnown RBP7.76□□□□□ -1.17
SNX13-201ENST00000409076 MPDZO75970 2070 aa7.76□□□□□ -1.17
SNX13-201ENST00000409076 HELZP42694 1942 aaKnown RBP7.76□□□□□ -1.17
SNX13-201ENST00000409076 CACNA1EQ15878 2313 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 COL4A6Q14031 1691 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 C1QTNF3-AMACRE9PGA6 284 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 SEMG1P04279 462 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ADRB1P08588 477 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 MAKP20794 623 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 DDX6P26196 483 aaKnown RBP eCLIP7.75□□□□□ -1.17
SNX13-201ENST00000409076 HSD3B2P26439 372 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 FBXW4P57775 412 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 DUSP5Q16690 384 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PGGHGQ32M88 737 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 LGALS14Q8TCE9 139 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 GNPDA2Q8TDQ7 276 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 TNFAIP8L1Q8WVP5 186 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 OVCA2Q8WZ82 227 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 SLC35A4Q96G79 324 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ABHD1Q96SE0 405 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ATF6BQ99941 703 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 DPAGT1Q9H3H5 408 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PLCXD1Q9NUJ7 323 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 KLK11Q9UBX7 282 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 TRIM64BA6NI03 449 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 A8MVJ9 347 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 SELENOFO60613 162 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 FZD7O75084 574 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 APOC3P02656 99 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 OR8G3PP0DMU2 310 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 CCL5P13501 91 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 HIST1H1TP22492 207 aaPredicted RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 ACVR2AP27037 513 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PXNP49023 591 aaPredicted RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 MAPK14Q16539 360 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 FCRLAQ7L513 359 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 SSX6Q7RTT6 188 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 TMPRSS12Q86WS5 348 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 COMMD2Q86X83 199 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 FBLIM1Q8WUP2 373 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 SMPDL3BQ92485 455 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 CREB3L1Q96BA8 519 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 RASD2Q96D21 266 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PRRC1Q96M27 445 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 BTBD1Q9H0C5 482 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 TTYH1Q9H313 450 aaPredicted RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 OR51J1Q9H342 316 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 UBQLN3Q9H347 655 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ANKHQ9HCJ1 492 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 TRIM36Q9NQ86 728 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 CACNG2Q9Y698 323 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PLXNA4Q9HCM2 1894 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 DICER1Q9UPY3 1922 aaKnown RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 DOCK8Q8NF50 2099 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 UNC119BA6NIH7 251 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 C17orf51A8MQB3 221 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 RNF13O43567 381 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ADH1CP00326 375 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PCSK2P16519 638 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 HOXB9P17482 250 aaPredicted RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 ENDOUP21128 410 aaKnown RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 DDOSTP39656 456 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 NKPD1Q17RQ9 610 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 PUS10Q3MIT2 529 aaKnown RBP7.75□□□□□ -1.17
SNX13-201ENST00000409076 TOR2AQ5JU69 321 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 GARNL3Q5VVW2 1013 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ELP2Q6IA86 826 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 DPPA4Q7L190 304 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 ZNF627Q7L945 461 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 KDM8Q8N371 416 aa7.75□□□□□ -1.17
SNX13-201ENST00000409076 GDPD1Q8N9F7 314 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms