RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GUSBP08236 651 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 MYL12AP19105 171 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TNNI3P19429 210 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 MAGP20916 626 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 CDH3P22223 829 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 NR4A1P22736 598 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 PSMA1P25786 263 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 LIPAP38571 399 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 PPP5CP53041 499 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 NUDT6P53370 316 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 RGS8P57771 180 aaPredicted RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 LSM3P62310 102 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 DUSP8Q13202 625 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 BIKQ13323 160 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TRA2AQ13595 282 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 GINS1Q14691 196 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 MED22Q15528 200 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 INAQ16352 499 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 SYT16Q17RD7 645 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TRIM16LQ309B1 348 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TMEM236Q5W0B7 351 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 PLEKHM3Q6ZWE6 761 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 RNF44Q7L0R7 432 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF554Q86TJ5 538 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TRIM73Q86UV7 250 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 DTX1Q86Y01 620 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 FAM20CQ8IXL6 584 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 RNF113BQ8IZP6 322 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 OR6T1Q8NGN1 323 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 FLVCR1-AS1Q8TAF5 88 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 NDNFQ8TB73 568 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 ACOT11Q8WXI4 607 aaPredicted RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 UCN3Q969E3 161 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 C16orf58Q96GQ5 468 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 YIPF4Q9BSR8 244 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TSSK6Q9BXA6 273 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 AMBNQ9NP70 447 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 DUSP22Q9NRW4 184 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 C14orf105Q9NVL8 296 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 MRPS18AQ9NVS2 196 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 TVP23BQ9NYZ1 205 aa11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 AKAP7Q9P0M2 348 aaPredicted RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 EXOSC1Q9Y3B2 195 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-203ENST00000407082 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 HYKKA2RU49 373 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC9B1P1A6NJY1 282 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 TTC36A6NLP5 189 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 C4orf51C9J302 202 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 STMND1H3BQB6 276 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 PLOD3O60568 738 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 FMO6PO60774 539 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 STX11O75558 287 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SULT1C4O75897 302 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 MED26O95402 600 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 GPR75O95800 540 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 ATP1B1P05026 303 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SCG5P05408 212 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 HSMCR30P0CW71 290 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 MMP11P24347 488 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 GADD45AP24522 165 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 CD82P27701 267 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 ARL4DP49703 201 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SEPHS1P49903 392 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 NCS1P62166 190 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 CHRNEQ04844 493 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 RAB40BQ12829 278 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SNAPC1Q16533 368 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 DEFB134Q4QY38 66 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 RPL13AP3Q6NVV1 102 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 DCDC5Q6ZRR9 648 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 PRSS42Q7Z5A4 293 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 IGFN1Q86VF2 1251 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 LACC1Q8IV20 430 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 CDK20Q8IZL9 346 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 CARFQ8N187 725 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF619Q8N2I2 560 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 CLDN22Q8N7P3 220 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 TCEANCQ8N8B7 351 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 GALNT6Q8NCL4 622 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 MORN4Q8NDC4 146 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 OR4D11Q8NGI4 311 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 TMEM163Q8TC26 289 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 GIMAP5Q96F15 307 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 IL4I1Q96RQ9 567 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 MCHR1Q99705 422 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 MACROD1Q9BQ69 325 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 SLIRPQ9GZT3 109 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 KLHL25Q9H0H3 589 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF768Q9H5H4 540 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 EQTNQ9NQ60 294 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 DIMT1Q9UNQ2 313 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 MRPS33Q9Y291 106 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF443Q9Y2A4 671 aaPredicted RBP11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 TMEM5Q9Y2B1 443 aa11.94□□□□□ -0.5
SMARCB1-203ENST00000407082 METTL15A6NJ78 407 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 H0YGG7 62 aa11.93□□□□□ -0.5
SMARCB1-203ENST00000407082 PRODHO43272 600 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms