RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 GALP22466 123 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 RFX3P48380 749 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 CTBP2P56545 445 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 FZD5Q13467 585 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 DEFB110Q30KQ9 67 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 THSD4Q6ZMP0 1018 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 TMEM99Q8N816 258 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 ZNF614Q8N883 585 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 OR9A4Q8NGU2 314 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 GRHL3Q8TE85 626 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 HOXB13Q92826 284 aaPredicted RBP15.58■□□□□ 0.09
NUP50-203ENST00000407019 HOXD1Q9GZZ0 328 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 ISG20L2Q9H9L3 353 aaKnown RBP15.58■□□□□ 0.09
NUP50-203ENST00000407019 SIGLEC7Q9Y286 467 aa15.58■□□□□ 0.09
NUP50-203ENST00000407019 PRR23D1E9PI22 279 aaPredicted RBP15.58■□□□□ 0.08
NUP50-203ENST00000407019 HCRTR1O43613 425 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 PRR23D2P0DMB1 279 aaPredicted RBP15.58■□□□□ 0.08
NUP50-203ENST00000407019 HTR3AP46098 478 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 DAB2P98082 770 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 FOXK2Q01167 660 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 HHEXQ03014 270 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 KLHL12Q53G59 568 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 RSBN1Q5VWQ0 802 aaPredicted RBP15.58■□□□□ 0.08
NUP50-203ENST00000407019 KIAA0895LQ68EN5 471 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 ZNF438Q7Z4V0 828 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 CNOT9Q92600 299 aaKnown RBP15.58■□□□□ 0.08
NUP50-203ENST00000407019 KISS1RQ969F8 398 aaPredicted RBP15.58■□□□□ 0.08
NUP50-203ENST00000407019 ATF6BQ99941 703 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 HCAR1Q9BXC0 346 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 SEMA6CQ9H3T2 930 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 FAM60AQ9NP50 221 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 POU2F3Q9UKI9 436 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 POMT2Q9UKY4 750 aa15.58■□□□□ 0.08
NUP50-203ENST00000407019 UNC80Q8N2C7 3258 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 A0A0B4J2E0 115 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 A0A1B0GX12 115 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 SLC22A31A6NKX4 558 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 SEC14L5O43304 696 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 RNF13O43567 381 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 CHP2O43745 196 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 HCN1O60741 890 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 RGS9O75916 674 aaPredicted RBP15.57■□□□□ 0.08
NUP50-203ENST00000407019 SOX30O94993 753 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 CTSEP14091 401 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 ST6GAL1P15907 406 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 TYRP1P17643 537 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 INSL4Q14641 139 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 ZNHIT3Q15649 155 aaPredicted RBP15.57■□□□□ 0.08
NUP50-203ENST00000407019 FRMD1Q8N878 549 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 ARSGQ96EG1 525 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 TBX5Q99593 518 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 LMF2Q9BU23 707 aaKnown RBP15.57■□□□□ 0.08
NUP50-203ENST00000407019 MEPEQ9NQ76 525 aaPredicted RBP15.57■□□□□ 0.08
NUP50-203ENST00000407019 INPP5EQ9NRR6 644 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 BABAM2Q9NXR7 383 aa15.57■□□□□ 0.08
NUP50-203ENST00000407019 TRAV27A0A087WT01 109 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SPTY2D1-AS1A0A0U1RR47 76 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 DAPL1A0PJW8 107 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SHISA3A0PJX4 238 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 RIIAD1A6NNX1 92 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 NCR1O76036 304 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 CFL1P23528 166 aaKnown RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 CCR5P51681 352 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 RPS7P62081 194 aaKnown RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 MZT2AQ6P582 158 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 CNIH2Q6PI25 160 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 ZC3H14Q6PJT7 736 aaKnown RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 TMEM91Q6ZNR0 172 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SCAIQ8N9R8 606 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SLC37A3Q8NCC5 494 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 RBCK1Q9BYM8 510 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 KCNN2Q9H2S1 579 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 FOLH1BQ9HBA9 442 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 FLRT3Q9NZU0 649 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 ARHGEF17Q96PE2 2063 aaPredicted RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 C2orf92A0A1B0GVN3 265 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 A0A1B0GWA3 101 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SYNDIG1LA6NDD5 238 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 CCDC182A6NF36 153 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 GTPBP1O00178 669 aaKnown RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 HPGDSO60760 199 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 RFPL3O75679 317 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 KRT8P05787 483 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 THEGLP0DJG4 465 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 SSTR4P31391 388 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 PSG6Q00889 435 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 C1orf61Q13536 156 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 FZD2Q14332 565 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 GALEQ14376 348 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 GATAD2AQ86YP4 633 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 GRAMD2AQ8IUY3 354 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 ARHGEF39Q8N4T4 335 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 C19orf47Q8N9M1 422 aaKnown RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 OR10H4Q8NGA5 316 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 OR51A7Q8NH64 312 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 PTP4A1Q93096 173 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 ART5Q96L15 291 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 NECTIN4Q96NY8 510 aa15.56■□□□□ 0.08
NUP50-203ENST00000407019 C11orf54Q9H0W9 315 aaPredicted RBP15.56■□□□□ 0.08
NUP50-203ENST00000407019 MOV10Q9HCE1 1003 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms