RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PSD4Q8NDX1 1056 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 ADAMTS16Q8TE57 1224 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 KLHDC3Q9BQ90 382 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 ANGPTL4Q9BY76 406 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 PPP4R1LQ9P1A2 415 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 ICAM5Q9UMF0 924 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 HRH3Q9Y5N1 445 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 U3KQV3 271 aa18.69■□□□□ 0.58
CHKB-201ENST00000406938 IGF2RP11717 2491 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 B4DXG7 233 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 G3V3Y1 287 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 DPM1O60762 260 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 NEURL1O76050 574 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 CDH12P55289 794 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 TAS2R41P59536 307 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 C17orf67Q0P5P2 114 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 PPP1R8Q12972 351 aaKnown RBP18.68■□□□□ 0.58
CHKB-201ENST00000406938 OR1C1Q15619 314 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 TRIP10Q15642 601 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 SPINK14Q6IE38 97 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 B4GALNT2Q8NHY0 566 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 SIGLEC12Q96PQ1 595 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 ZNF559Q9BR84 538 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 REEP1Q9H902 201 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 PROK2Q9HC23 129 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 SDHAF3Q9NRP4 125 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 SACM1LQ9NTJ5 587 aa18.68■□□□□ 0.58
CHKB-201ENST00000406938 OR5H15A6NDH6 313 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 P04436 131 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 P2RX1P51575 399 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 TMPRSS3P57727 454 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 OR1Q1Q15612 314 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 SNCBQ16143 134 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 COL28A1Q2UY09 1125 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 OFCC1Q8IZS5 231 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 OR52J3Q8NH60 311 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 DHRS1Q96LJ7 313 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 FRMD6Q96NE9 622 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 FNDC11Q9BVV2 318 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 RNF32Q9H0A6 362 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 NMNAT1Q9HAN9 279 aaPredicted RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 STOML1Q9UBI4 398 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 SAMHD1Q9Y3Z3 626 aaKnown RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 LYVE1Q9Y5Y7 322 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 NINQ8N4C6 2090 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 ANKRD33BA6NCL7 494 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 SAC3D1A6NKF1 404 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 CDK2AP1O14519 115 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 E2F6O75461 281 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 SLC25A12O75746 678 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 LINGO3P0C6S8 592 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 PEX2P28328 305 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 SLC6A8P48029 635 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 UCNP55089 124 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 FOXD4Q12950 439 aaPredicted RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 INPP5JQ15735 1006 aaPredicted RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 COLEC12Q5KU26 742 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 EPHX4Q8IUS5 362 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 CADM2Q8N3J6 435 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 TOR1AIP2Q8NFQ8 470 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 OR5W2Q8NH69 310 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 ZCCHC14Q8WYQ9 949 aaKnown RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 NR4A3Q92570 626 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 NTNG2Q96CW9 530 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 POLR2J2Q9GZM3 115 aaKnown RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 POLR2J3Q9H1A7 115 aaKnown RBP18.67■□□□□ 0.58
CHKB-201ENST00000406938 TIMMDC1Q9NPL8 285 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 ACER3Q9NUN7 267 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 OAZ3Q9UMX2 235 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 LAMA5O15230 3695 aa18.67■□□□□ 0.58
CHKB-201ENST00000406938 IGLV3-32A0A0A0MS00 114 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 A0A0G2JMM0 328 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 A0A1W2PPB8 328 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 A0A1W2PRS3 328 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 KIR3DP1A8MWS1 328 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 TAF4O00268 1085 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 TNFRSF11BO00300 401 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 CASQ2O14958 399 aaPredicted RBP18.66■□□□□ 0.58
CHKB-201ENST00000406938 OR5F1O95221 314 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 GADD45GO95257 159 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 NUDT14O95848 222 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 H1F0P07305 194 aaKnown RBP18.66■□□□□ 0.58
CHKB-201ENST00000406938 UQCRBP14927 111 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 ZNF23P17027 643 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 ARG2P78540 354 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 LPCAT4Q643R3 524 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 TMEM179BQ7Z7N9 219 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 LSMEM1Q8N8F7 131 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 PIK3C3Q8NEB9 887 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 NRG4Q8WWG1 115 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 SLC41A3Q96GZ6 507 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 EPYCQ99645 322 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 CIB1Q99828 191 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 TRIM2Q9C040 744 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 RASSF4Q9H2L5 321 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 TMEM27Q9HBJ8 222 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 MAN2C1Q9NTJ4 1040 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 MED11Q9P086 117 aa18.66■□□□□ 0.58
CHKB-201ENST00000406938 A0A087WV48 116 aa18.65■□□□□ 0.58
CHKB-201ENST00000406938 TRAPPC13A5PLN9 417 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms