RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 GPR119Q8TDV5 335 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 OIT3Q8WWZ8 545 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 ZNF524Q96C55 264 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 TREX2Q9BQ50 279 aaPredicted RBP13.19□□□□□ -0.3
CDPF1-203ENST00000404583 PIGQQ9BRB3 760 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 LAT2Q9GZY6 243 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 SLC35A3Q9Y2D2 325 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 FAM215AQ9Y5M1 114 aa13.19□□□□□ -0.3
CDPF1-203ENST00000404583 DSPPQ9NZW4 1301 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 A0A0G2JPF8 293 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 KDM4EB2RXH2 506 aaPredicted RBP13.18□□□□□ -0.3
CDPF1-203ENST00000404583 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 HNRNPCL3B7ZW38 293 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 FAM47E-STBD1D6RA91 191 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 H3BML4 177 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
CDPF1-203ENST00000404583 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
CDPF1-203ENST00000404583 LINGO3P0C6S8 592 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 HNRNPCL4P0DMR1 293 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 ARAFP10398 606 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 CPN1P15169 458 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 IL7RP16871 459 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 CCR4P51679 360 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 SUMO3P55854 103 aaPredicted RBP13.18□□□□□ -0.3
CDPF1-203ENST00000404583 PLAURQ03405 335 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 PMPCAQ10713 525 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 SKP2Q13309 424 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 CBFBQ13951 182 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 GNA13Q14344 377 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 ADRM1Q16186 407 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 C1orf185Q5T7R7 199 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 VRK2Q86Y07 508 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 TREML1Q86YW5 311 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 PEX5LQ8IYB4 626 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 NFKBIDQ8NI38 313 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 RP9Q8TA86 221 aaKnown RBP13.18□□□□□ -0.3
CDPF1-203ENST00000404583 POC1BQ8TC44 478 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
CDPF1-203ENST00000404583 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 PMM1Q92871 262 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 LRRC58Q96CX6 371 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 MYLK2Q9H1R3 596 aa13.18□□□□□ -0.3
CDPF1-203ENST00000404583 C5orf58C9J3I9 102 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 FXYD1O00168 92 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 PGM3O95394 542 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 HOXD4P09016 255 aaPredicted RBP13.17□□□□□ -0.3
CDPF1-203ENST00000404583 PEPDP12955 493 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 COX4I1P13073 169 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
CDPF1-203ENST00000404583 CLDN18P56856 261 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 NUP107P57740 925 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 CDK6Q00534 326 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 NANOGP8Q6NSW7 305 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 RPTNQ6XPR3 784 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 B3GNT6Q6ZMB0 384 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 MRGPRGQ86SM5 289 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 UBQLNLQ8IYU4 475 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 GTPBP8Q8N3Z3 284 aaPredicted RBP13.17□□□□□ -0.3
CDPF1-203ENST00000404583 PCYOX1LQ8NBM8 494 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 FAM71CQ8NEG0 241 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 OR52P1PQ8NH57 321 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 ITLN2Q8WWU7 325 aaPredicted RBP13.17□□□□□ -0.3
CDPF1-203ENST00000404583 SMPDL3BQ92485 455 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 CNOT9Q92600 299 aaKnown RBP13.17□□□□□ -0.3
CDPF1-203ENST00000404583 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 RCN3Q96D15 328 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 RNF145Q96MT1 663 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 TTYH2Q9BSA4 534 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 TMEM38AQ9H6F2 299 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 KAT8Q9H7Z6 458 aaKnown RBP13.17□□□□□ -0.3
CDPF1-203ENST00000404583 NANOGQ9H9S0 305 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 BCL2L10Q9HD36 194 aa13.17□□□□□ -0.3
CDPF1-203ENST00000404583 H0Y3Z8 333 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 H0YC42 278 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 LINC01387J3KSC0 135 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 NPPAP01160 153 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 OPN1LWP04000 364 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 GLI4P10075 376 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 GP1BBP13224 206 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 NID1P14543 1247 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 ZNF708P17019 499 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 PSMA4P25789 261 aaKnown RBP13.16□□□□□ -0.3
CDPF1-203ENST00000404583 RYKP34925 604 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 SUCLG1P53597 346 aaKnown RBP13.16□□□□□ -0.3
CDPF1-203ENST00000404583 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
CDPF1-203ENST00000404583 CLDN15P56746 228 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 FOXF1Q12946 379 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 SCARB2Q14108 478 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 QPRTQ15274 297 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 BCL2A1Q16548 175 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 ACSF3Q4G176 576 aaPredicted RBP13.16□□□□□ -0.3
CDPF1-203ENST00000404583 MRPL2Q5T653 305 aaKnown RBP13.16□□□□□ -0.3
CDPF1-203ENST00000404583 PRAMEF8Q5VWM4 474 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms