RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 SCARB1Q8WTV0 552 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 ZC3HAV1LQ96H79 300 aaKnown RBP13.05□□□□□ -0.32
HMGA2-204ENST00000403681 BTBD2Q9BX70 525 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 GXYLT2A0PJZ3 443 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 LINC00862A6NCI5 91 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 PSMD9O00233 223 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 HMGN4O00479 90 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 B3GALT2O43825 422 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 MAS1P04201 325 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 ASGR2P07307 311 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 ARHGDIBP52566 201 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 CLDN12P56749 244 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 POMZP3Q6PJE2 187 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 KLHDC8AQ8IYD2 350 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 C16orf58Q96GQ5 468 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 DEC1Q9P2X7 70 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 FLVCR2Q9UPI3 526 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 LRRC37AA6NMS7 1700 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 SCN4AP35499 1836 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 TOR1AO14656 332 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 MRPS10P82664 201 aaKnown RBP13.05□□□□□ -0.32
HMGA2-204ENST00000403681 FAM76BQ5HYJ3 339 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 MORN1Q5T089 497 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 HENMT1Q5T8I9 393 aaKnown RBP13.05□□□□□ -0.32
HMGA2-204ENST00000403681 LCTLQ6UWM7 567 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 CAMKMTQ7Z624 323 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 OR10K1Q8NGX5 313 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 NSMAFQ92636 917 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 TM4SF18Q96CE8 201 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 ACTRT3Q9BYD9 372 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 CPEB1Q9BZB8 566 aaKnown RBP13.05□□□□□ -0.32
HMGA2-204ENST00000403681 ASF1BQ9NVP2 202 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 FBXL2Q9UKC9 423 aa13.05□□□□□ -0.32
HMGA2-204ENST00000403681 TRAV18A0A075B6X5 111 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 H3BNC9 293 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 LIMS3P0CW19 117 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 LIMS4P0CW20 117 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 PRMT2P55345 433 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 NRG3P56975 720 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 SORDQ00796 357 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 ABI3BPQ7Z7G0 1075 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 NRROSQ86YC3 692 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 TMEM25Q86YD3 366 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 WBP2Q969T9 261 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 HINT3Q9NQE9 182 aaKnown RBP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 EMC3Q9P0I2 261 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 PSMA3P25788 255 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 SLC6A1P30531 599 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 B4GALNT1Q00973 533 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 COL9A2Q14055 689 aaPredicted RBP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 C1orf94Q6P1W5 598 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 ZNF546Q86UE3 836 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 ZNF615Q8N8J6 731 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 SCLYQ96I15 445 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 MACROD1Q9BQ69 325 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 CHST8Q9H2A9 424 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 FN3KQ9H479 309 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 POLR1DQ9Y2S0 133 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 BLOC1S5-TXNDC5H3BN57 136 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 ATP1B1P05026 303 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 GKN3PP0CG01 181 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 PRKXP51817 358 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 RAE1P78406 368 aaKnown RBP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 GTPBP8Q8N3Z3 284 aaPredicted RBP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 OR4K14Q8NGD5 310 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 OR9A2Q8NGT5 310 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 OR7D2Q96RA2 312 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 USP36Q9P275 1121 aaKnown RBP13.04□□□□□ -0.32
HMGA2-204ENST00000403681 V9GY05 133 aa13.04□□□□□ -0.32
HMGA2-204ENST00000403681 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 CDK2AP1O14519 115 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 SLC2A10O95528 541 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 CYB5AP00167 134 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 ITGA3P26006 1051 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 CCND3P30281 292 aaPredicted RBP13.03□□□□□ -0.32
HMGA2-204ENST00000403681 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
HMGA2-204ENST00000403681 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 POMGNT2Q8NAT1 580 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 BBS1Q8NFJ9 593 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 GOT1L1Q8NHS2 421 aaPredicted RBP13.03□□□□□ -0.32
HMGA2-204ENST00000403681 ZNF563Q8TA94 476 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 ATG5Q9H1Y0 275 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 KCNK6Q9Y257 313 aa13.03□□□□□ -0.32
HMGA2-204ENST00000403681 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
HMGA2-204ENST00000403681 CACNB4O00305 520 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms