RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SLC22A25Q6T423 547 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 FBXL14Q8N1E6 418 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 WDR31Q8NA23 367 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLC16A11Q8NCK7 471 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ATP6V1C2Q8NEY4 427 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 OR52N5Q8NH56 324 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 B4GALNT2Q8NHY0 566 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GPR151Q8TDV0 419 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C16orf58Q96GQ5 468 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 EGLN2Q96KS0 407 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MRGPRX4Q96LA9 322 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SORCS2Q96PQ0 1159 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SIRT5Q9NXA8 310 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TIMM22Q9Y584 194 aa10.44□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NPIPA5A0A0B4J1W7 369 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 LRP5LA4QPB2 252 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NPIPA7E9PJI5 369 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CCDC188H7C350 402 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KIAA0513O60268 411 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CYTIPO60759 359 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RAD51DO75771 328 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KCNH1O95259 989 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TGFAP01135 160 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RBP1P09455 135 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PABPC4LP0CB38 370 aaKnown RBP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NPIPA8P0DM63 369 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 APEHP13798 732 aaKnown RBP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GGT1P19440 569 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ME2P23368 584 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF41P51814 821 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 FOXA1P55317 472 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CHRNEQ04844 493 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 UAP1Q16222 522 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SWI5Q1ZZU3 235 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF385BQ569K4 471 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 LIPNQ5VXI9 398 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ANKRD26P1Q6NSI1 321 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RFLNBQ8N5W9 214 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SEMA6DQ8NFY4 1073 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CDC26Q8NHZ8 85 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZFP90Q8TF47 636 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CIDECQ96AQ7 238 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MUCL1Q96DR8 90 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 USB1Q9BQ65 265 aaKnown RBP10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NMRK1Q9NWW6 199 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ICAM5Q9UMF0 924 aa10.43□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ESYT3A0FGR9 886 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 FAM187AA6NFU0 413 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ESPNB1AK53 854 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TCF21O43680 179 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 DLX3O60479 287 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SMIM24O75264 130 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLITRK5O94991 958 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SLU7O95391 586 aaKnown RBP10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 DHRS4L1P0CG22 281 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PRKCAP17252 672 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ELK4P28324 431 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PSMD4P55036 377 aaKnown RBP10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF763Q0D2J5 394 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RASGEF1BQ0VAM2 473 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SQLEQ14534 574 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNHIT3Q15649 155 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 SPIN4Q56A73 249 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF678Q5SXM1 525 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ANKS4BQ8N8V4 417 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 METTL6Q8TCB7 284 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GPR119Q8TDV5 335 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RADILQ96JH8 1075 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TMEM237Q96Q45 408 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF382Q96SR6 550 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 INPP5KQ9BT40 448 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 MRTO4Q9UKD2 239 aaKnown RBP10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 POU2F3Q9UKI9 436 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 GRID1Q9ULK0 1009 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 POLR3HQ9Y535 204 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1P3-201ENST00000403408 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 A0A1W2PQD3 144 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 NPIPB8E9PQR5 432 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 M0R1B8 84 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PDLIM1O00151 329 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ULK1O75385 1050 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KRT6AP02538 564 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KRT6BP04259 564 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ITGA5P08648 1049 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CSF3P09919 207 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PRPS2P11908 318 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 ZNF23P17027 643 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PTAFRP25105 342 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 KRT6CP48668 564 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PDLIM4P50479 330 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 PRKAG1P54619 331 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 RAC3P60763 192 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 HSPB3Q12988 150 aa10.41□□□□□ -0.74
SPTLC1P3-201ENST00000403408 CALCOCO2Q13137 446 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms