RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SDF2Q99470 211 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 OPN3Q9H1Y3 402 aaPredicted RBP12.03□□□□□ -0.48
VCX3A-202ENST00000398729 TMEM185BQ9H7F4 350 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 EXD2Q9NVH0 621 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 PNPOQ9NVS9 261 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 ELOVL5Q9NYP7 299 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 PROCRQ9UNN8 238 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 CARD8Q9Y2G2 431 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 PLEKHA6Q9Y2H5 1048 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 EMC9Q9Y3B6 208 aa12.03□□□□□ -0.48
VCX3A-202ENST00000398729 RTTNQ86VV8 2226 aa12.02□□□□□ -0.48
VCX3A-202ENST00000398729 A0A0J9YW62 118 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 E9PBE3 544 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ANKRD28O15084 1053 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ERLIN1O75477 346 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 STX11O75558 287 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 CPSF4O95639 269 aaKnown RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 AGR2O95994 175 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 CGAP01215 116 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 OPN1LWP04000 364 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 POU2F1P14859 743 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 UQCRC2P22695 453 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ELK4P28324 431 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 SLC6A8P48029 635 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 KCNJ5P48544 419 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 RNF144AP50876 292 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 CTBP2P56545 445 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 WDR4P57081 412 aaKnown RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 FOXF1Q12946 379 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 GUSBP1Q15486 140 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 CTU2Q2VPK5 515 aaKnown RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 SPANXN4Q5MJ08 99 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 HBMQ6B0K9 141 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF474Q6S9Z5 364 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 Q71RC1 249 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 C16orf62Q7Z3J2 963 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ANKRD46Q86W74 232 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 LILRA2Q8N149 483 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 CLEC4FQ8N1N0 589 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF610Q8N9Z0 462 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 OR2V1Q8NHB1 315 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 POC1BQ8TC44 478 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 GMPPAQ96IJ6 420 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 KLHL15Q96M94 604 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 KLHDC3Q9BQ90 382 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 NMUR2Q9GZQ4 415 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 SERHL2Q9H4I8 314 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 GLRX2Q9NS18 164 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 THAP1Q9NVV9 213 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 ICAM5Q9UMF0 924 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 TESMINQ9Y4I5 508 aa12.02□□□□□ -0.49
VCX3A-202ENST00000398729 GPC6Q9Y625 555 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 FBN1P35555 2871 aaKnown RBP12.02□□□□□ -0.49
VCX3A-202ENST00000398729 SERINC4A6NH21 518 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 TRPC5OSA6NMA1 111 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 GJE1A6NN92 205 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 HDAC3O15379 428 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF264O43296 627 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 OIP5O43482 229 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 CXCL13O43927 109 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 EIF4E2O60573 245 aaKnown RBP12.01□□□□□ -0.49
VCX3A-202ENST00000398729 SCN2BO60939 215 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 HRGP04196 525 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 UBL4AP11441 157 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 S100A3P33764 101 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 SFTPDP35247 375 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 UGT2B10P36537 528 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 SLC18A1P54219 525 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 CARD18P57730 90 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 MAGOHP61326 146 aaKnown RBP12.01□□□□□ -0.49
VCX3A-202ENST00000398729 PHC1P78364 1004 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 CASP8Q14790 479 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 POU4F3Q15319 338 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 GPR68Q15743 365 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 NDUFAF6Q330K2 333 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 ARHGAP11BQ3KRB8 267 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 FAM174BQ3ZCQ3 159 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 PDZK1Q5T2W1 519 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 ATAD3BQ5T9A4 648 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 GTF2IRD2BQ6EKJ0 949 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 PAMR1Q6UXH9 720 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 SPATA19Q7Z5L4 167 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 GTF2IRD2Q86UP8 949 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 TMCO5AQ8N6Q1 288 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 TOR1AIP2Q8NFQ8 470 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 OR6K3Q8NGY3 331 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 OR5W2Q8NH69 310 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 RFWD2Q8NHY2 731 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 FBXO27Q8NI29 283 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 MIPOL1Q8TD10 442 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 MGARPQ8TDB4 240 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 GPR119Q8TDV5 335 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 OSTF1Q92882 214 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
VCX3A-202ENST00000398729 MRGPRX4Q96LA9 322 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 ALPK1Q96QP1 1244 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 MED18Q9BUE0 208 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 OR51I1Q9H343 314 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 TIGARQ9NQ88 270 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms