RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CT62P0C5K7 136 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CELP19835 753 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SLC35F1Q5T1Q4 408 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 QSOX2Q6ZRP7 698 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 NOXA1Q86UR1 476 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 COX18Q8N8Q8 333 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RPLP0P6Q8NHW5 317 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 WDFY2Q96P53 400 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SECISBP2Q96T21 854 aaKnown RBP17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 UBQLN3Q9H347 655 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MED20Q9H944 212 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SPTBP11277 2137 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HCRTR1O43613 425 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 IL7P13232 177 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 GABRA5P31644 462 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF155Q12901 538 aaPredicted RBP17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF619Q8N2I2 560 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 LILRB1Q8NHL6 650 aaPredicted RBP17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 DIRAS2Q96HU8 199 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RNF170Q96K19 258 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TEX12Q9BXU0 123 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 HRASLS2Q9NWW9 162 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PIAS3Q9Y6X2 628 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SPEGQ15772 3267 aa17.03■□□□□ 0.32
CHRFAM7A-202ENST00000397827 STX11O75558 287 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 MAKP20794 623 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 FXYD6P3P58550 94 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ILF3Q12906 894 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ARMC4Q5T2S8 1044 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 PLBD1Q6P4A8 553 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 RANBP3LQ86VV4 465 aaPredicted RBP17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 SIRT6Q8N6T7 355 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 CLDN22Q8N7P3 220 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 OR13H1Q8NG92 308 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 OR51G2Q8NGK0 314 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 ZNF649Q9BS31 505 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 OR52D1Q9H346 318 aa17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 TDRD6O60522 2096 aaKnown RBP17.02■□□□□ 0.32
CHRFAM7A-202ENST00000397827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 A0A1W2PQ09 198 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SLC35F4A4IF30 521 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NOS1APO75052 506 aaPredicted RBP17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF10P21506 573 aaPredicted RBP17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SSTR4P31391 388 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DAB2P98082 770 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SRSF5Q13243 272 aaKnown RBP17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR1Q1Q15612 314 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SPRYD4Q8WW59 207 aaPredicted RBP17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TMCO6Q96DC7 493 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MSLNLQ96KJ4 702 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 H2AFY2Q9P0M6 372 aaPredicted RBP17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CPNE7Q9UBL6 633 aa17.02■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TCRBV21S2A2A0A5A6 115 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GXYLT2A0PJZ3 443 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ATP6V1G2-DDX39BF2Z307 99 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CYR61O00622 381 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CTSBP07858 339 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SNTA1Q13424 505 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DSG2Q14126 1118 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 EIPR1Q53HC9 387 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZAR1Q86SH2 424 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BAHD1Q8TBE0 780 aaPredicted RBP17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FYTTD1Q96QD9 318 aaKnown RBP17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TEKT2Q9UIF3 430 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TRAPPC13A5PLN9 417 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FABP12A6NFH5 140 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SGK494L7N484 410 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TNFRSF10CO14798 259 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ATP1B1P05026 303 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 THBS1P07996 1170 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HTR1FP30939 366 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GABRA3P34903 492 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RFX2P48378 723 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 VSX2P58304 361 aaPredicted RBP17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HTR4Q13639 388 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DEFB110Q30KQ9 67 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GLYR1Q49A26 553 aaPredicted RBP17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ESCO2Q56NI9 601 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CXXC5Q7LFL8 322 aaKnown RBP17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ART5Q96L15 291 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TBX5Q99593 518 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SIDT1Q9NXL6 827 aaKnown RBP17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 COMMD3Q9UBI1 195 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GSTK1Q9Y2Q3 226 aa17.01■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR5K3A6NET4 321 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CASKO14936 926 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NCR1O76036 304 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NID1P14543 1247 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PRICKLE4Q2TBC4 344 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DGAT2L6Q6ZPD8 337 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 KLBQ86Z14 1044 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FANK1Q8TC84 345 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TMEM239Q8WW34 195 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HCAR1Q9BXC0 346 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BEX2Q9BXY8 128 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RBCK1Q9BYM8 510 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TWSG1Q9GZX9 223 aa17■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ISG20L2Q9H9L3 353 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms