RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 YIPF7Q8N8F6 280 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 OR51G2Q8NGK0 314 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 SLC41A2Q96JW4 573 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 SAMD8Q96LT4 415 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 AGAP4Q96P64 663 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 GMPR2Q9P2T1 348 aaKnown RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PLXNA3P51805 1871 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 AIREO43918 545 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 RAB36O95755 333 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 HNRNPFP52597 415 aaKnown RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 OR7A5Q15622 319 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 TIGD6Q17RP2 521 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 C6orf141Q5SZD1 244 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PLEKHG7Q6ZR37 379 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 LRRC56Q8IYG6 542 aaPredicted RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 AMER3Q8N944 861 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 C19orf18Q8NEA5 215 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 OR52E2Q8NGJ4 325 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 OR6N2Q8NGY6 317 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 CCNL2Q96S94 520 aaPredicted RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 SRA1Q9HD15 236 aaKnown RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 OCIAD1Q9NX40 245 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PRR33A8MZF0 331 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 GNALP38405 381 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PCYT1AP49585 367 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 TAS2R43P59537 309 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 RNF4P78317 190 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 DUSP8Q13202 625 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 COL19A1Q14993 1142 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PAMR1Q6UXH9 720 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 DND1Q8IYX4 353 aaKnown RBP7.66□□□□□ -1.18
PTPRD-204ENST00000397606 HIST1H2AAQ96QV6 131 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 GPER1Q99527 375 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PIGQQ9BRB3 760 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 DSN1Q9H410 356 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 PLGRKTQ9HBL7 147 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 RLIMQ9NVW2 624 aa7.66□□□□□ -1.18
PTPRD-204ENST00000397606 TSC2P49815 1807 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 SH3D21A4FU49 640 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 C19orf67A6NJJ6 358 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 B4E171 279 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 PRAMEF4O60810 478 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 MT-ND5P03915 603 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 CCL4P13236 92 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 FKBP2P26885 142 aaKnown RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 TSPAN7P41732 249 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 RBPJQ06330 500 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 NKG7Q16617 165 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 PRAMEF9Q5VWM5 478 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 FAM199XQ6PEV8 388 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 FGD2Q7Z6J4 655 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 MARCH3Q86UD3 253 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 ALDH16A1Q8IZ83 802 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 OR2L13Q8N349 312 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 OR6T1Q8NGN1 323 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 OR4K13Q8NH42 304 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 CHCHD6Q9BRQ6 235 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 NXF5Q9H1B4 397 aaKnown RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 LHX9Q9NQ69 397 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 SLC6A5Q9Y345 797 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 SPAARA0A1B0GVQ0 90 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 A0A1B0GWA3 101 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 CIB4A0PJX0 185 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 SAGE2PA6NJ88 616 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 MITFO75030 526 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 TFPTP0C1Z6 253 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 DCKP27707 260 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 SSPNQ14714 243 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 SGCAQ16586 387 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 CRTC2Q53ET0 693 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 CARD17Q5XLA6 110 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 TRIQKQ629K1 86 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 MAMSTRQ6ZN01 415 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 ZNF836Q6ZNA1 936 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 KCNE4Q8WWG9 221 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 TTC9Q92623 222 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 ZC3H10Q96K80 434 aaKnown RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 WWTR1Q9GZV5 400 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 HMG20AQ9NP66 347 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 PRMT8Q9NR22 394 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 INIPQ9NRY2 104 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 TUBA8Q9NY65 449 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-204ENST00000397606 TMEM9Q9P0T7 183 aa7.65□□□□□ -1.18
PTPRD-204ENST00000397606 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.19
PTPRD-204ENST00000397606 COL4A6Q14031 1691 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 OR2W5A6NFC9 320 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 AGAP5A6NIR3 686 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 CENPXA8MT69 81 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 J3QLW9 94 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 LGI1O95970 557 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 SPARCP09486 303 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF19P17023 458 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 CSRP3P50461 194 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 P2RX1P51575 399 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 TSPAN31Q12999 210 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 C16orf72Q14CZ0 275 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 CSRP2Q16527 193 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 ISXQ2M1V0 245 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 ZBED5Q49AG3 693 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 KCTD21Q4G0X4 260 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms