RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 STK11Q15831 433 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 PRSS53Q2L4Q9 553 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 GLE1Q53GS7 698 aaKnown RBP8.29□□□□□ -1.08
NEDD9-203ENST00000397378 TCHHL1Q5QJ38 904 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-203ENST00000397378 ACSM2BQ68CK6 577 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 TMEM108Q6UXF1 575 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 FCRLAQ7L513 359 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 MISPQ8IVT2 679 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 CEP112Q8N8E3 955 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 CDYL2Q8N8U2 506 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 OR4C3Q8NH37 302 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 ACPTQ9BZG2 426 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 VPS11Q9H270 941 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 DPH5Q9H2P9 285 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 GLIPR2Q9H4G4 154 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 GRHL1Q9NZI5 618 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 KMT2CQ8NEZ4 4911 aaKnown RBP8.29□□□□□ -1.08
NEDD9-203ENST00000397378 A0A1W2PQD3 144 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 LRP5LA4QPB2 252 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 OR5H1A6NKK0 313 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 GJE1A6NN92 205 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 SMAD9O15198 467 aaKnown RBP8.28□□□□□ -1.08
NEDD9-203ENST00000397378 ZSCAN12O43309 604 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 RGS14O43566 566 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 ULK1O75385 1050 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 NKX2-2O95096 273 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 DHRS4L1P0CG22 281 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 BMP4P12644 408 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 TSPAN8P19075 237 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 GGT1P19440 569 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PTAFRP25105 342 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 NTSP30990 170 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 LCN1P31025 176 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 HSD17B3P37058 310 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PAFAH1B1P43034 410 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 MAGEA12P43365 314 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 LIMS1P48059 325 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 FABP6P51161 128 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 HILS1P60008 231 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 GUCY2DQ02846 1103 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 CLCQ05315 142 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF763Q0D2J5 394 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 RASA2Q15283 850 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 VPS26BQ4G0F5 336 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 ARL13AQ5H913 290 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-203ENST00000397378 FAM219BQ5XKK7 198 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF544Q6NX49 715 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 SLC22A25Q6T423 547 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 MMGT1Q8N4V1 131 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD9-203ENST00000397378 FAM110BQ8TC76 370 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PIK3R3Q92569 461 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 APIPQ96GX9 242 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 AMDHD1Q96NU7 426 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 FOXN4Q96NZ1 517 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 JMJD8Q96S16 334 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PKP2Q99959 881 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PSD2Q9BQI7 771 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 COQ10BQ9H8M1 238 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD9-203ENST00000397378 KLHL9Q9P2J3 617 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 RNF14Q9UBS8 474 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 PRSS50Q9UI38 385 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 ING1Q9UK53 422 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-203ENST00000397378 FKBP7Q9Y680 259 aa8.28□□□□□ -1.08
NEDD9-203ENST00000397378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD9-203ENST00000397378 SERTM1A2A2V5 107 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 A8MT66 165 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 KIF2AO00139 706 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 EFNA2O43921 213 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 ANXA4P09525 319 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 COL6A2P12110 1019 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 PCMT1P22061 227 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 IGHV1-2P23083 117 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 CD40P25942 277 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 ZFP36P26651 326 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 PLTPP55058 493 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 RAC3P60763 192 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 MRPS25P82663 173 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 CAV1Q03135 178 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 C2orf80Q0P641 193 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 FOXF1Q12946 379 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 FAM71E1Q6IPT2 247 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 SHQ1Q6PI26 577 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 KLHL17Q6TDP4 642 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 B3GLCTQ6Y288 498 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF433Q8N7K0 673 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 GATSQ8NAP1 163 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 OR6Y1Q8NGX8 325 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 OR2W6PQ8NHA6 318 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 B4GALNT2Q8NHY0 566 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 FBXO25Q8TCJ0 367 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 GPR151Q8TDV0 419 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 ZFP90Q8TF47 636 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 MRRFQ96E11 262 aaKnown RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 SH3YL1Q96HL8 342 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-203ENST00000397378 ZNF382Q96SR6 550 aa8.27□□□□□ -1.09
NEDD9-203ENST00000397378 KLHDC3Q9BQ90 382 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms