RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 LTBRP36941 435 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 CLCNKAP51800 687 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 EPHA4P54764 986 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 RGS8P57771 180 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 PRDX1Q06830 199 aaKnown RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 MFSD13AQ14CX5 517 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF750Q32MQ0 723 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 BTN2A1Q7KYR7 527 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 LUZP2Q86TE4 346 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 BPHLQ86WA6 291 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 LSMEM1Q8N8F7 131 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 OR8K5Q8NH50 307 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ABHD4Q8TB40 342 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 MS4A6EQ96DS6 147 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 PGLYRP3Q96LB9 341 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF681Q96N22 645 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 RPP25Q9BUL9 199 aaKnown RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 KLHL31Q9H511 634 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF624Q9P2J8 865 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 THAP10Q9P2Z0 257 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 IL20RAQ9UHF4 553 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF223Q9UK11 482 aaPredicted RBP12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ZMIZ1Q9ULJ6 1067 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 PRKAB1Q9Y478 270 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 ATG4BQ9Y4P1 393 aa12.38□□□□□ -0.43
TRIM40-207ENST00000396581 GLOD5A6NK44 160 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 FAM183AA6NL82 134 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 GPR171O14626 319 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 CTDSPLO15194 276 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 GSTZ1O43708 216 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-207ENST00000396581 ERAL1O75616 437 aaKnown RBP12.37□□□□□ -0.43
TRIM40-207ENST00000396581 KAT7O95251 611 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 AIFM1O95831 613 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 MT-ND5P03915 603 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 ADRB3P13945 408 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 CSNK2A2P19784 350 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-207ENST00000396581 GDI1P31150 447 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 PTGER1P34995 402 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 CAPZA2P47755 286 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 RAB8AP61006 207 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 SNTA1Q13424 505 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 DYRK1AQ13627 763 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 COL19A1Q14993 1142 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 FAM27D1Q5T7N8 215 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
TRIM40-207ENST00000396581 PLBD1Q6P4A8 553 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 ADAMTSL4Q6UY14 1074 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 KRT74Q7RTS7 529 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 LNX2Q8N448 690 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 TOMM5Q8N4H5 51 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 NUP43Q8NFH3 380 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 LRRC20Q8TCA0 184 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 OR8D1Q8WZ84 308 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 PRSS27Q9BQR3 290 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
TRIM40-207ENST00000396581 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
TRIM40-207ENST00000396581 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 UCKL1Q9NWZ5 548 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 NTMQ9P121 344 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
TRIM40-207ENST00000396581 DAPL1A0PJW8 107 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ANKRD61A6NGH8 418 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 E9PI62 339 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 G3V3Q6 166 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 MPC2O95563 127 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 IFNA7P01567 189 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ATP5A1P25705 553 aaKnown RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 PITPNAQ00169 270 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 EXOSC2Q13868 293 aaKnown RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SLC25A35Q3KQZ1 300 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ITPRIPL2Q3MIP1 535 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 KLHL12Q53G59 568 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 DMKNQ6E0U4 476 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 FRRS1Q6ZNA5 592 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 LRRTM4Q86VH4 590 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SIX5Q8N196 739 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ACOT4Q8N9L9 421 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 OR2A1Q8NGT9 310 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 NDC1Q9BTX1 674 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SARGQ9BW04 601 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 CACNG6Q9BXT2 260 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ACTRT3Q9BYD9 372 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ACTR6Q9GZN1 396 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SCP2D1Q9UJQ7 156 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF443Q9Y2A4 671 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 TRAV1-2A0A0B4J238 106 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 A0A1B0GVC2 190 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 A0A1W2PS29 197 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 A6NIN4 97 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 FCMRO60667 390 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 PRKACBP22694 351 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 GIFP27352 417 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms