RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ANXA8P13928 327 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SPINK2P20155 84 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 ST13P50502 369 aaKnown RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 COPZ1P61923 177 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 IL1RL1Q01638 556 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF117Q03924 483 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 AIMP2Q13155 320 aaKnown RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SRSF6Q13247 344 aaKnown RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SEC23BQ15437 767 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF613Q6PF04 617 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 MISPQ8IVT2 679 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 DND1Q8IYX4 353 aaKnown RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 CADM2Q8N3J6 435 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 LSMEM1Q8N8F7 131 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 RNF217Q8TC41 542 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SH3YL1Q96HL8 342 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 FEVQ99581 238 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 FUZQ9BT04 418 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 OSBPL11Q9BXB4 747 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 RPS6KB2Q9UBS0 482 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 RAB26Q9ULW5 256 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SH3PXD2BA1X283 911 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 ARRDC5A6NEK1 342 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 DLGAP1O14490 977 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 OR10H3O60404 316 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SNAP29O95721 258 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 THY1P04216 161 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 UQCRBP14927 111 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 IGFBP5P24593 272 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 ITGA3P26006 1051 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 RAD23AP54725 363 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 CLN3Q13286 438 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 MEP1AQ16819 746 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 ATP1A1-AS1Q5TC04 95 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 B3GNTL1Q67FW5 361 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 KDM4DQ6B0I6 523 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 FAHD1Q6P587 224 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 CLEC1AQ8NC01 280 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 PSD2Q9BQI7 771 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SCNM1Q9BWG6 230 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 METTL7AQ9H8H3 244 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 KRT84Q9NSB2 600 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 TMEFF2Q9UIK5 374 aaPredicted RBP18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 AP4B1Q9Y6B7 739 aa18.68■□□□□ 0.58
VCPKMT-202ENST00000395860 SLC6A8P48029 635 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 RPP38P78345 283 aaKnown RBP18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 ZIK1Q3SY52 487 aaPredicted RBP18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 C6orf52Q5T4I8 152 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 NKAIN4Q8IVV8 208 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 LINC00471Q8N535 108 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 TOR1AIP2Q8NFQ8 470 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 DUSP19Q8WTR2 217 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 RDH12Q96NR8 316 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF556Q9HAH1 456 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 HPF1Q9NWY4 346 aa18.67■□□□□ 0.58
VCPKMT-202ENST00000395860 EML6Q6ZMW3 1958 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 A0A0B4J2E0 115 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 A0A1B0GWA3 101 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 A0A1B0GX12 115 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 GMFGO60234 142 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 ACADSP16219 412 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 RFX4Q33E94 735 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 NHSL2Q5HYW2 709 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 ACER2Q5QJU3 275 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF730Q6ZMV8 503 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 RRM2BQ7LG56 351 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 GALNT5Q7Z7M9 940 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 APLFQ8IW19 511 aaPredicted RBP18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 AQP11Q8NBQ7 271 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 RNF138Q8WVD3 245 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 THAP4Q8WY91 577 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 PSMF1Q92530 271 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 NAF1Q96HR8 494 aaKnown RBP18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 Q9H521 79 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 GALNT9Q9HCQ5 603 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 SELENONQ9NZV5 590 aa18.66■□□□□ 0.58
VCPKMT-202ENST00000395860 A0A087WUU8 490 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 C17orf51A8MQB3 221 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 PRKAR1AP10644 381 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ITPKBP27987 946 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 IDH2P48735 452 aaKnown RBP18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 P2RX1P51575 399 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 C17orf67Q0P5P2 114 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 MERTKQ12866 999 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ALG10BQ5I7T1 473 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 BICRALQ6AI39 1079 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF770Q6IQ21 691 aaPredicted RBP18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 DHRSXQ8N5I4 330 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 OR4K5Q8NGD3 323 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 B4GALNT2Q8NHY0 566 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ZNF563Q8TA94 476 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ACOT11Q8WXI4 607 aaPredicted RBP18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ADI1Q9BV57 179 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 LHPPQ9H008 270 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 SDHAF3Q9NRP4 125 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 TEKT2Q9UIF3 430 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ICAM5Q9UMF0 924 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CHCHD2Q9Y6H1 151 aaPredicted RBP18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CPAMD8Q8IZJ3 1885 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 C2orf72A6NCS6 295 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms