RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ARPINQ7Z6K5 226 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 PGAM4Q8N0Y7 254 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 RBM15BQ8NDT2 890 aaKnown RBP14.98□□□□□ -0.01
CXCL1-201ENST00000395761 FBXO27Q8NI29 283 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 SSC4DQ8WTU2 575 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 DTNBP1Q96EV8 351 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 TMEM19Q96HH6 336 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 TREX2Q9BQ50 279 aaPredicted RBP14.98□□□□□ -0.01
CXCL1-201ENST00000395761 VKORC1Q9BQB6 163 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 SLC39A3Q9BRY0 314 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 HHATLQ9HCP6 504 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 THUMPD1Q9NXG2 353 aaKnown RBP14.98□□□□□ -0.01
CXCL1-201ENST00000395761 AP3M1Q9Y2T2 418 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 ZNF337Q9Y3M9 751 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 FAM215AQ9Y5M1 114 aa14.98□□□□□ -0.01
CXCL1-201ENST00000395761 OR2M5A3KFT3 312 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 KDM4EB2RXH2 506 aaPredicted RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 EIF4E2O60573 245 aaKnown RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 CYP7B1O75881 506 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 UBTFL6P0CB48 400 aaPredicted RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 RPS4Y1P22090 263 aaKnown RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 CHMP24386 653 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 ACVR2AP27037 513 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 GCKP35557 465 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 PGM1P36871 562 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 LHX2P50458 406 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 P2RX1P51575 399 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 CRISP3P54108 245 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 PSME3P61289 254 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 ADORA2A-AS1P86434 159 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 SLC25A3Q00325 362 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 SRYQ05066 204 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 TOMM34Q15785 309 aaPredicted RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 ADRM1Q16186 407 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 ZSCAN26Q16670 478 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 PLPPR5Q32ZL2 321 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 GLYR1Q49A26 553 aaPredicted RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 AAGABQ6PD74 315 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 MYO7BQ6PIF6 2116 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 SLC15A3Q8IY34 581 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 ULK2Q8IYT8 1036 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 TMCO5AQ8N6Q1 288 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 POC1BQ8TC44 478 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 GPR119Q8TDV5 335 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 THUMPD3Q9BV44 507 aaKnown RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 PRDM14Q9GZV8 571 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 LAT2Q9GZY6 243 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 CALML5Q9NZT1 146 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 SUCOQ9UBS9 1254 aaKnown RBP14.97□□□□□ -0.01
CXCL1-201ENST00000395761 CORO2BQ9UQ03 480 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 CAMK2AQ9UQM7 478 aa14.97□□□□□ -0.01
CXCL1-201ENST00000395761 DSPPQ9NZW4 1301 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 A0A087WZY1 265 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 A0A0G2JPF8 293 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 TMEM247A6NEH6 219 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 FIGNL2A6NMB9 653 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 HNRNPCL2B2RXH8 293 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 HNRNPCL3B7ZW38 293 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 WDR1O75083 606 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 NUDT14O95848 222 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 LINGO3P0C6S8 592 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 HNRNPCL4P0DMR1 293 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 ARAFP10398 606 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 ZNF41P51814 821 aaPredicted RBP14.96□□□□□ -0.01
CXCL1-201ENST00000395761 PER3P56645 1201 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 CLDN18P56856 261 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 MXRA7P84157 204 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 VRK2Q86Y07 508 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 FAM71CQ8NEG0 241 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 OR52P1PQ8NH57 321 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 OR5W2Q8NH69 310 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 NFKBIDQ8NI38 313 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 OIT3Q8WWZ8 545 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 CNOT9Q92600 299 aaKnown RBP14.96□□□□□ -0.01
CXCL1-201ENST00000395761 PMM1Q92871 262 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 PIGQQ9BRB3 760 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 BTBD10Q9BSF8 475 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 BCL2L10Q9HD36 194 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 TMEM181Q9P2C4 612 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 ABCD2Q9UBJ2 740 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 SLC35A3Q9Y2D2 325 aa14.96□□□□□ -0.01
CXCL1-201ENST00000395761 AHRRA9YTQ3 701 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 C5orf58C9J3I9 102 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 H0YC42 278 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 PGM3O95394 542 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 DBIP07108 87 aaKnown RBP14.95□□□□□ -0.02
CXCL1-201ENST00000395761 GLI4P10075 376 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 CPN1P15169 458 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 ZNF708P17019 499 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 PSMA4P25789 261 aaKnown RBP14.95□□□□□ -0.02
CXCL1-201ENST00000395761 CCR4P51679 360 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 SUCLG1P53597 346 aaKnown RBP14.95□□□□□ -0.02
CXCL1-201ENST00000395761 TPD52P55327 224 aaPredicted RBP14.95□□□□□ -0.02
CXCL1-201ENST00000395761 SUMO3P55854 103 aaPredicted RBP14.95□□□□□ -0.02
CXCL1-201ENST00000395761 CLDN15P56746 228 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 NUP107P57740 925 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 CDK6Q00534 326 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 PMPCAQ10713 525 aa14.95□□□□□ -0.02
CXCL1-201ENST00000395761 GNA13Q14344 377 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms