RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 HNRNPCL2B2RXH8 293 aa18■□□□□ 0.47
SNCA-203ENST00000394986 HNRNPCL3B7ZW38 293 aa18■□□□□ 0.47
SNCA-203ENST00000394986 E9PLN8 166 aa18■□□□□ 0.47
SNCA-203ENST00000394986 AIM2O14862 343 aa18■□□□□ 0.47
SNCA-203ENST00000394986 HNRNPCL1O60812 293 aaKnown RBP18■□□□□ 0.47
SNCA-203ENST00000394986 PGM3O95394 542 aa18■□□□□ 0.47
SNCA-203ENST00000394986 LINGO3P0C6S8 592 aa18■□□□□ 0.47
SNCA-203ENST00000394986 HNRNPCL4P0DMR1 293 aa18■□□□□ 0.47
SNCA-203ENST00000394986 IL7RP16871 459 aa18■□□□□ 0.47
SNCA-203ENST00000394986 POU3F2P20265 443 aaPredicted RBP18■□□□□ 0.47
SNCA-203ENST00000394986 CHMP24386 653 aa18■□□□□ 0.47
SNCA-203ENST00000394986 SUMO3P55854 103 aaPredicted RBP18■□□□□ 0.47
SNCA-203ENST00000394986 ADORA2A-AS1P86434 159 aa18■□□□□ 0.47
SNCA-203ENST00000394986 SCARB2Q14108 478 aa18■□□□□ 0.47
SNCA-203ENST00000394986 GNA13Q14344 377 aa18■□□□□ 0.47
SNCA-203ENST00000394986 ZNF836Q6ZNA1 936 aa18■□□□□ 0.47
SNCA-203ENST00000394986 UBQLNLQ8IYU4 475 aa18■□□□□ 0.47
SNCA-203ENST00000394986 TOR1AIP2Q8NFQ8 470 aa18■□□□□ 0.47
SNCA-203ENST00000394986 OR52P1PQ8NH57 321 aa18■□□□□ 0.47
SNCA-203ENST00000394986 OR5W2Q8NH69 310 aa18■□□□□ 0.47
SNCA-203ENST00000394986 OR10A6Q8NH74 314 aa18■□□□□ 0.47
SNCA-203ENST00000394986 BBS10Q8TAM1 723 aa18■□□□□ 0.47
SNCA-203ENST00000394986 SSC4DQ8WTU2 575 aa18■□□□□ 0.47
SNCA-203ENST00000394986 OIT3Q8WWZ8 545 aa18■□□□□ 0.47
SNCA-203ENST00000394986 SMPDL3BQ92485 455 aa18■□□□□ 0.47
SNCA-203ENST00000394986 RNF145Q96MT1 663 aa18■□□□□ 0.47
SNCA-203ENST00000394986 VKORC1Q9BQB6 163 aa18■□□□□ 0.47
SNCA-203ENST00000394986 PIGQQ9BRB3 760 aa18■□□□□ 0.47
SNCA-203ENST00000394986 PIF1Q9H611 641 aa18■□□□□ 0.47
SNCA-203ENST00000394986 TMEM38AQ9H6F2 299 aa18■□□□□ 0.47
SNCA-203ENST00000394986 DNAJB12Q9NXW2 375 aaKnown RBP18■□□□□ 0.47
SNCA-203ENST00000394986 ZNF443Q9Y2A4 671 aaPredicted RBP18■□□□□ 0.47
SNCA-203ENST00000394986 SLC35A3Q9Y2D2 325 aa18■□□□□ 0.47
SNCA-203ENST00000394986 BAHCC1Q9P281 2608 aa18■□□□□ 0.47
SNCA-203ENST00000394986 FREM3P0C091 2139 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 FAM47E-STBD1D6RA91 191 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 H0YC42 278 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 ADAM11O75078 769 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 WDR1O75083 606 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 FAM107AO95990 144 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 NID1P14543 1247 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 IL11P20809 199 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 AQP1P29972 269 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 RYKP34925 604 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 TPD52P55327 224 aaPredicted RBP17.99■□□□□ 0.47
SNCA-203ENST00000394986 CLDN18P56856 261 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 MRPL2Q5T653 305 aaKnown RBP17.99■□□□□ 0.47
SNCA-203ENST00000394986 C1orf185Q5T7R7 199 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 ENPP6Q6UWR7 440 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 PLXDC2Q6UX71 529 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 GTPBP8Q8N3Z3 284 aaPredicted RBP17.99■□□□□ 0.47
SNCA-203ENST00000394986 RSPO3Q9BXY4 272 aaPredicted RBP17.99■□□□□ 0.47
SNCA-203ENST00000394986 BCL2L10Q9HD36 194 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 RLIMQ9NVW2 624 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 GID8Q9NWU2 228 aa17.99■□□□□ 0.47
SNCA-203ENST00000394986 H0Y3Z8 333 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 AP3D1O14617 1153 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 OPN1LWP04000 364 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 PSMA4P25789 261 aaKnown RBP17.98■□□□□ 0.47
SNCA-203ENST00000394986 PER3P56645 1201 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 CBFBQ13951 182 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 QPRTQ15274 297 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 GLYR1Q49A26 553 aaPredicted RBP17.98■□□□□ 0.47
SNCA-203ENST00000394986 ACSF3Q4G176 576 aaPredicted RBP17.98■□□□□ 0.47
SNCA-203ENST00000394986 LIN52Q52LA3 116 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 PRAMEF8Q5VWM4 474 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 PRAMEF7Q5VXH5 474 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 REEP3Q6NUK4 255 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 RPTNQ6XPR3 784 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 ZZZ3Q8IYH5 903 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 PM20D2Q8IYS1 436 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 OR8J3Q8NGG0 315 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 FBXO27Q8NI29 283 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 PMM1Q92871 262 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 ZBTB8AQ96BR9 441 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 TMEM185BQ9H7F4 350 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 USP22Q9UPT9 525 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 WIPF3A6NGB9 483 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 SEC14L5O43304 696 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 NPPAP01160 153 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 CPN1P15169 458 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 ZNF708P17019 499 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 ZNF17P17021 662 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 PRKCAP17252 672 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 SLC6A2P23975 617 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 GZMMP51124 257 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 CLDN20P56880 219 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 NUP107P57740 925 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 EEF1A1P68104 462 aaKnown RBP17.98■□□□□ 0.47
SNCA-203ENST00000394986 PMPCAQ10713 525 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 B3GNT6Q6ZMB0 384 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 NET1Q7Z628 596 aaPredicted RBP17.98■□□□□ 0.47
SNCA-203ENST00000394986 CMIPQ8IY22 773 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 CLIP4Q8N3C7 705 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 C11orf65Q8NCR3 313 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 CHST2Q9Y4C5 530 aa17.98■□□□□ 0.47
SNCA-203ENST00000394986 GTF3C1Q12789 2109 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 PCNX3Q9H6A9 2034 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 C7orf72A4D263 438 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms