RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SERTAD3Q9UJW9 196 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ASB4Q9Y574 426 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 PCDHGA6Q9Y5G7 932 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 LOC100509620A0A075B734 347 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 A0A0X1KG70 313 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TRBC2A0A5B9 178 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TMEM150CB9EJG8 249 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TSTD3H0UI37 97 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TPST2O60704 377 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 HTR3BO95264 441 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NUDT14O95848 222 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 HTR1AP08908 422 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 RRASP10301 218 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NPPBP16860 134 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NDUFV2P19404 249 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 PCMT1P22061 227 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NFYAP23511 347 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 HOXA1P49639 335 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 CCR4P51679 360 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 METAP1P53582 386 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 RBBP4Q09028 425 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 PDSS1Q5T2R2 415 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ARL9Q6T311 187 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TMEM184AQ6ZMB5 413 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZNF704Q6ZNC4 412 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 SLC16A13Q7RTY0 426 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 KIAA0907Q7Z7F0 614 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 GLRX5Q86SX6 157 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ADGRF3Q8IZF5 1079 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 KLHL36Q8N4N3 616 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZNF615Q8N8J6 731 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 FBXO15Q8NCQ5 510 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 OR2T11Q8NH01 316 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NFKBIDQ8NI38 313 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 METTL21AQ8WXB1 218 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 RFKQ969G6 155 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 MOAP1Q96BY2 351 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 LINC00615Q96LM1 132 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZNF583Q96ND8 569 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NDC1Q9BTX1 674 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZDHHC5Q9C0B5 715 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 MFFQ9GZY8 342 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 PDE7BQ9NP56 450 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 GFOD1Q9NXC2 390 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TAS2R10Q9NYW0 307 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 NDRG3Q9UGV2 375 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 SIT1Q9Y3P8 196 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TCRBV5S2A0A599 114 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 OR5K3A6NET4 321 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 CD8B2A6NJW9 211 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZNF670-ZNF695F2Z2N8 137 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 SULT1C2O00338 296 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 PRKYO43930 277 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 PIP5K1CO60331 668 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 FMO6PO60774 539 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZNF432O94892 652 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 IFNA4P05014 189 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ALPPP05187 535 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 CD8BP10966 210 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ACPPP15309 386 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 CRISP1P54107 249 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 DEFB134Q4QY38 66 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 CRB2Q5IJ48 1285 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 KIAA1211LQ6NV74 962 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZNF730Q6ZMV8 503 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 KRT77Q7Z794 578 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 LHFPL3Q86UP9 236 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 RDH10Q8IZV5 341 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 CSNK1A1LQ8N752 337 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 COX18Q8N8Q8 333 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 LMNTD1Q8N9Z9 388 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 GIMAP1Q8WWP7 306 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 C3orf49Q96BT1 292 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 DDOQ99489 341 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 GDF15Q99988 308 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TAAR2Q9P1P5 351 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 TRAPPC4Q9Y296 219 aa5.33□□□□□ -1.56
RFFL-202ENST00000394597 ZFC3H1O60293 1989 aaKnown RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 NUP214P35658 2090 aaPredicted RBP5.33□□□□□ -1.56
RFFL-202ENST00000394597 GPR37L1O60883 481 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 KRT33AO76009 404 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CD3GP09693 182 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PRKAR1BP31321 381 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ETV6P41212 452 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 SLC6A12P48065 614 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 RAB13P51153 203 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CEBPGP53567 150 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 RGS8P57771 180 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 TAF13Q15543 124 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 UGT3A2Q3SY77 523 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PYCR3Q53H96 274 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 METTL11BQ5VVY1 283 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CD276Q5ZPR3 534 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 REEP3Q6NUK4 255 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PGAP1Q75T13 922 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 FOXRED2Q8IWF2 684 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CLECL1Q8IZS7 167 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 GJD3Q8N144 294 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 RNF175Q8N4F7 328 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms