RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CCNJQ5T5M9 372 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 OR56A1Q8NGH5 318 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 LILRB1Q8NHL6 650 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 CLHC1Q8NHS4 586 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 PHOSPHO1Q8TCT1 267 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 ROBO4Q8WZ75 1007 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 OR5P2Q8WZ92 322 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 JADE3Q92613 823 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 CDS1Q92903 461 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 MOAP1Q96BY2 351 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 TRMT61AQ96FX7 289 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 PPP3R2Q96LZ3 170 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 KLHDC3Q9BQ90 382 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 C12orf49Q9H741 205 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 L2HGDHQ9H9P8 463 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 BCO1Q9HAY6 547 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 ATAD3AQ9NVI7 634 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 KIAA1324LA8MWY0 1029 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 THBS1P07996 1170 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 DANCRP0C864 163 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 PRKCAP17252 672 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 SHC1P29353 583 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 SFTPDP35247 375 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 ATP12AP54707 1039 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 RAC3P60763 192 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 ITGADQ13349 1161 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 LSM12Q3MHD2 195 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 CBLN3Q6UW01 205 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 FCRLAQ7L513 359 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 TUSC5Q8IXB3 177 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 TOR1AIP2Q8NFQ8 470 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 FBXO27Q8NI29 283 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 SFXN5Q8TD22 340 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 GPR119Q8TDV5 335 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 ADAMTS15Q8TE58 950 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 ZFP90Q8TF47 636 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 TWIST2Q8WVJ9 160 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 FBXW5Q969U6 566 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 COQ8BQ96D53 544 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 RHOXF2Q9BQY4 288 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 SRXN1Q9BYN0 137 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 POTEKPQ9BYX7 375 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 GRIP2Q9C0E4 1043 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 C12orf65Q9H3J6 166 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 EML4Q9HC35 981 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 GPATCH2Q9NW75 528 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 FAF1Q9UNN5 650 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 LAMP3Q9UQV4 416 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 TRAF6Q9Y4K3 522 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 FBN1P35555 2871 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 FBN3Q75N90 2809 aa15.55■□□□□ 0.08
SNRPA1-202ENST00000394082 PRR14LQ5THK1 2151 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 EIF4E2O60573 245 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 DNAJA2O60884 412 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 FESP07332 822 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 CD3EP07766 207 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 IL32P24001 234 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 SERPINB5P36952 375 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 CCT3P49368 545 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 SELENBP1Q13228 472 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 TNK1Q13470 666 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 TAB1Q15750 504 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 GALNTL6Q49A17 601 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 XKR7Q5GH72 579 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 DCST2Q5T1A1 773 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 Q6ZT83 130 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 NUFIP2Q7Z417 695 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 DDIASQ8IXT1 998 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 OR5W2Q8NH69 310 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 RAB3IL1Q8TBN0 382 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 PIWIL2Q8TC59 973 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 KISS1RQ969F8 398 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 ARL8AQ96BM9 186 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 PRPF18Q99633 342 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 MDFIQ99750 246 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 COQ10BQ9H8M1 238 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 KLHL9Q9P2J3 617 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 CARD8Q9Y2G2 431 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 FIS1Q9Y3D6 152 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 DTNAQ9Y4J8 743 aa15.54■□□□□ 0.08
SNRPA1-202ENST00000394082 PIP5K1BO14986 540 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 CRLF1O75462 422 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 NUDT14O95848 222 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 LAMP1P11279 417 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 IDUAP35475 653 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 KRTAP1-1Q07627 177 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 TMEM176BQ3YBM2 270 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 ZNF672Q499Z4 452 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 ARL13AQ5H913 290 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 HEPHL1Q6MZM0 1159 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 BHLHB9Q6PI77 547 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 SEZ6L2Q6UXD5 910 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 C4orf33Q8N1A6 199 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 BANPQ8N9N5 519 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 OR7A2PQ8NGA2 310 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 SPATA3Q8NHX4 192 aa15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 SMAP2Q8WU79 429 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-202ENST00000394082 OIT3Q8WWZ8 545 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms