RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 C9orf40Q8IXQ3 194 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 MCOLN2Q8IZK6 566 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 CLEC4FQ8N1N0 589 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 CCDC26Q8TAB7 109 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 ZNF671Q8TAW3 534 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 ADAMTS16Q8TE57 1224 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 RPL3LQ92901 407 aaKnown RBP2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 BADQ92934 168 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 TUBGCP3Q96CW5 907 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 RPRD1AQ96P16 312 aaPredicted RBP2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 MCCC1Q96RQ3 725 aaPredicted RBP2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 CCT8L2Q96SF2 557 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 PLIN2Q99541 437 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC35A5Q9BS91 424 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 NIPSNAP3BQ9BS92 247 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 DPH7Q9BTV6 452 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 PARD6BQ9BYG5 372 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 RAB34Q9BZG1 259 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 GFRA4Q9GZZ7 299 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 PNO1Q9NRX1 252 aaKnown RBP2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 UFSP2Q9NUQ7 469 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 HYPKQ9NX55 129 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 DHRS4-AS1Q9P1J3 65 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 ARMCX1Q9P291 453 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC2A6Q9UGQ3 507 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 CDH9Q9ULB4 789 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 CLEC4AQ9UMR7 237 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 SCML2Q9UQR0 700 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 ASB3Q9Y575 518 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 POGZQ7Z3K3 1410 aa2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 COL5A2P05997 1499 aaPredicted RBP2.3□□□□□ -2.04
TRAJ40-201ENST00000390497 SNED1Q8TER0 1413 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 RPAP1Q9BWH6 1393 aaPredicted RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CCDC182A6NF36 153 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 PP2D1A8MPX8 630 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 GOLGA8SH3BPF8 625 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 TAPBPO15533 448 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 LALBAP00709 142 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 MX1P20591 662 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 BCL3P20749 454 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CYP2B6P20813 491 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 IDSP22304 550 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 IGHV1-2P23083 117 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 LAP3P28838 519 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 RPL13AP40429 203 aaKnown RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 P2RY1P47900 373 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 RPL29P47914 159 aaKnown RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CSRP3P50461 194 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC25A1P53007 311 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 PLK1P53350 603 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CDH4P55283 916 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 ZFP36L1Q07352 338 aaKnown RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC10A7Q0GE19 358 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 ASAH1Q13510 395 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 PEX6Q13608 980 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 DDX39BQ13838 428 aaKnown RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SERTAD2Q14140 314 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC15A2Q16348 729 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SSX2Q16385 188 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 C15orf32Q32M92 178 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 GLYR1Q49A26 553 aaPredicted RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SFT2D3Q587I9 215 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CCDC183Q5T5S1 534 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 KCNIP4Q6PIL6 250 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 VITQ6UXI7 678 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CCDC80Q76M96 950 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 GDPD3Q7L5L3 318 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 GTSCR1Q86UQ5 136 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 NBPF5PQ86XG9 351 aaPredicted RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 KRTAP7-1Q8IUC3 87 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 KIR3DL3Q8N743 410 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 OR1F12Q8NHA8 337 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 M1APQ8TC57 530 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 PELI1Q96FA3 418 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 C1orf147Q96MC9 270 aaPredicted RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 EDEM2Q9BV94 578 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 GCOM2Q9BZD3 368 aaPredicted RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CAB39LQ9H9S4 337 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 SMOXQ9NWM0 555 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 PAK5Q9P286 719 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 PRPF19Q9UMS4 504 aaKnown RBP2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 N6AMT1Q9Y5N5 214 aa2.29□□□□□ -2.04
TRAJ40-201ENST00000390497 CLSPNQ9HAW4 1339 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 A0A087WWV3 80 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 LRP5LA4QPB2 252 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 DHRS7CA6NNS2 312 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 F5H6K3 240 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 H3BMQ9 156 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 SULT2B1O00204 365 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 SAP18O00422 153 aaKnown RBP2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 POLR2DO15514 142 aaKnown RBP2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 FCMRO60667 390 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 HCN1O60741 890 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 SCRG1O75711 98 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 DUSP14O95147 198 aaKnown RBP2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 VENTXO95231 258 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 TBX6O95947 436 aaPredicted RBP2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 NDUFB10O96000 172 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 PGK1P00558 417 aa2.28□□□□□ -2.04
TRAJ40-201ENST00000390497 FOLR2P14207 255 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms