RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 DRAM1Q8N682 238 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 PNLDC1Q8NA58 520 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 MINDY2Q8NBR6 621 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 BBOF1Q8ND07 529 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 B3GNT7Q8NFL0 401 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR1J4Q8NGS1 313 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 OR51Q1Q8NH59 317 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ZNF483Q8TF39 744 aaPredicted RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ALG3Q92685 438 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 RORBQ92753 470 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 DIO2Q92813 273 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 EXT2Q93063 718 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 TSR2Q969E8 191 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 PYCR2Q96C36 320 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ELMOD3Q96FG2 381 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 VMP1Q96GC9 406 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 PEX11GQ96HA9 241 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 REXO5Q96IC2 774 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 RBM41Q96IZ5 413 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 DMRTB1Q96MA1 342 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 TTC25Q96NG3 672 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 IPO9Q96P70 1041 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 BBS4Q96RK4 519 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 MCCC1Q96RQ3 725 aaPredicted RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 TUBGCP5Q96RT8 1024 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 SHANK2-AS3Q9BTD1 123 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 RIOK2Q9BVS4 552 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 KRTAP4-4Q9BYR3 166 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ABCG8Q9H221 673 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 P2RY12Q9H244 342 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 SP140LQ9H930 580 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 POLD4Q9HCU8 107 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ABCB10Q9NRK6 738 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 CYSLTR2Q9NS75 346 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 FAM207AQ9NSI2 230 aaPredicted RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ETAA1Q9NY74 926 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 PLAC8Q9NZF1 115 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 CWC15Q9P013 229 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 SLAMF8Q9P0V8 285 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 VPS54Q9P1Q0 977 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ATXN10Q9UBB4 475 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 NLKQ9UBE8 527 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 STOML1Q9UBI4 398 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 FAM8A1Q9UBU6 413 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 LIMA1Q9UHB6 759 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 TBK1Q9UHD2 729 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 AMACRQ9UHK6 382 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 DUSP13Q9UII6 198 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 MCTS1Q9ULC4 181 aaKnown RBP0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 NOX1Q9Y5S8 564 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 ADGRG1Q9Y653 693 aa0.66□□□□□ -2.3
RNU6-42P-201ENST00000384165 A0A1W2PPI3 338 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 A0A1W2PPW3 197 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 hCG_1642624A0A1W2PR95 340 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 ILVBLA1L0T0 632 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 TSPAN11A1L157 253 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 ERICH2A1L162 156 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 LINC01548A6NM66 108 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 NPIPB6E9PJ23 425 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 PSMD11O00231 422 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 TP53I11O14683 189 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 GNB5O14775 395 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 APOL1O14791 398 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 ERI3O43414 337 aaKnown RBP0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CDH16O75309 829 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 AVILO75366 819 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 SLC43A1O75387 559 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 RDH16O75452 317 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 RAD51DO75771 328 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CDK14O94921 469 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CLSTN1O94985 981 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 LETM1O95202 739 aaPredicted RBP0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 LRATO95237 230 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CTDNEP1O95476 244 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 TSPAN13O95857 204 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 IGLV1-51P01701 117 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 GNAI2P04899 355 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CSN3P07498 182 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 APRTP07741 180 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 SLC35G4P0C7Q5 338 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 KITP10721 976 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 THRBP10828 461 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 GM2AP17900 193 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 MSH3P20585 1137 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 IL10P22301 178 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 EEF1GP26641 437 aaKnown RBP0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 SERPINA4P29622 427 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 ADMP35318 185 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 PRPHP41219 470 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 MAGEB1P43366 347 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 NPBWR2P48146 333 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 REG1BP48304 166 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 EVCP57679 992 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 RHOAP61586 193 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 ARF6P62330 175 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 RPP38P78345 283 aaKnown RBP0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 HNRNPUQ00839 825 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 ACSM1Q08AH1 577 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CTBP1Q13363 440 aa0.65□□□□□ -2.31
RNU6-42P-201ENST00000384165 CUL4BQ13620 913 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms