RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 AHCTF1Q8WYP5 2266 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 A0A087WUU8 490 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 A0A1W2PQD3 144 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 CLIC3O95833 236 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 GNAO1P09471 354 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 CBLP22681 906 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 CAPGP40121 348 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 EPS8Q12929 822 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 KCNAB2Q13303 367 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 RFX4Q33E94 735 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 ZNF440Q8IYI8 595 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 HGDQ93099 445 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 PSD2Q9BQI7 771 aa24.57■■□□□ 1.52
MSX1-201ENST00000382723 PAPOLBQ9NRJ5 636 aaKnown RBP24.57■■□□□ 1.52
MSX1-201ENST00000382723 ARRDC5A6NEK1 342 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 SLC34A2O95436 690 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 ANGPTL1O95841 491 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 SOX3P41225 446 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 ZNF730Q6ZMV8 503 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 TMEM255BQ8WV15 326 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 TRIM2Q9C040 744 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 ANKRD19PQ9H560 264 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 FAM118AQ9NWS6 357 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 PCSK5Q92824 1860 aa24.56■■□□□ 1.52
MSX1-201ENST00000382723 A0A1B0GWA3 101 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 HCRTR2O43614 444 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 FBXO45P0C2W1 286 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 LINGO3P0C6S8 592 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 ADARB1P78563 741 aaKnown RBP24.55■■□□□ 1.52
MSX1-201ENST00000382723 ZNF117Q03924 483 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 CAMK2BQ13554 666 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 PGBD2Q6P3X8 592 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 NUP54Q7Z3B4 507 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 RPS19BP1Q86WX3 136 aaKnown RBP24.55■■□□□ 1.52
MSX1-201ENST00000382723 SLC15A4Q8N697 577 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 ZNF555Q8NEP9 628 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 OR10G3Q8NGC4 313 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 ADAMTS17Q8TE56 1095 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 OR6B1O95007 311 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 LIPCP11150 499 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 LIFP15018 202 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 PDK3Q15120 406 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 ZNF613Q6PF04 617 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 APLFQ8IW19 511 aaPredicted RBP24.55■■□□□ 1.52
MSX1-201ENST00000382723 CHERPQ8IWX8 916 aaKnown RBP24.55■■□□□ 1.52
MSX1-201ENST00000382723 SPACA9Q96E40 222 aaPredicted RBP24.55■■□□□ 1.52
MSX1-201ENST00000382723 RPS6KB2Q9UBS0 482 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 YARS2Q9Y2Z4 477 aaKnown RBP24.55■■□□□ 1.52
MSX1-201ENST00000382723 PCDHGB5Q9Y5G0 923 aa24.55■■□□□ 1.52
MSX1-201ENST00000382723 C2orf72A6NCS6 295 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 DXOO77932 396 aaKnown RBP24.54■■□□□ 1.52
MSX1-201ENST00000382723 CDH2P19022 906 aaPredicted RBP24.54■■□□□ 1.52
MSX1-201ENST00000382723 COPZ1P61923 177 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 RRM2BQ7LG56 351 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 VASH2Q86V25 355 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 MEX3DQ86XN8 651 aaKnown RBP24.54■■□□□ 1.52
MSX1-201ENST00000382723 SIRT6Q8N6T7 355 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 LSMEM1Q8N8F7 131 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 PRSS27Q9BQR3 290 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 ANKRD60Q9BZ19 345 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 LAT2Q9GZY6 243 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 EXOSC3Q9NQT5 275 aaKnown RBP24.54■■□□□ 1.52
MSX1-201ENST00000382723 UBAP1Q9NZ09 502 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 MGAT4BQ9UQ53 548 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 POFUT2Q9Y2G5 429 aa24.54■■□□□ 1.52
MSX1-201ENST00000382723 A0A0B4J2E0 115 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 A0A1B0GX12 115 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 H0YAE9 185 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 LYPD3O95274 346 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 SERPINA7P05543 415 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 CLK3P49761 638 aaKnown RBP24.53■■□□□ 1.52
MSX1-201ENST00000382723 BICRALQ6AI39 1079 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 IL20RBQ6UXL0 311 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 WDR88Q6ZMY6 472 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 ACOT11Q8WXI4 607 aaPredicted RBP24.53■■□□□ 1.52
MSX1-201ENST00000382723 TTC9Q92623 222 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 KLHDC3Q9BQ90 382 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 IDH2P48735 452 aaKnown RBP24.53■■□□□ 1.52
MSX1-201ENST00000382723 SSR4P51571 173 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 UGT2B15P54855 530 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 MLF1P58340 268 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 NTRK2Q16620 822 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 ZER1Q7Z7L7 766 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 MARVELD2Q8N4S9 558 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 LINC00471Q8N535 108 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 DUSP19Q8WTR2 217 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 ASB15Q8WXK1 588 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 GALNT9Q9HCQ5 603 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 KLRF1Q9NZS2 232 aa24.53■■□□□ 1.52
MSX1-201ENST00000382723 ADAP00813 363 aa24.52■■□□□ 1.52
MSX1-201ENST00000382723 ITPKBP27987 946 aa24.52■■□□□ 1.52
MSX1-201ENST00000382723 RTP5Q14D33 572 aa24.52■■□□□ 1.52
MSX1-201ENST00000382723 ZNF791Q3KP31 576 aaPredicted RBP24.52■■□□□ 1.52
MSX1-201ENST00000382723 ALG10BQ5I7T1 473 aa24.52■■□□□ 1.52
MSX1-201ENST00000382723 PRICKLE2Q7Z3G6 844 aa24.52■■□□□ 1.52
MSX1-201ENST00000382723 BRIX1Q8TDN6 353 aaKnown RBP24.52■■□□□ 1.52
MSX1-201ENST00000382723 PIP5K1CO60331 668 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 EPHA2P29317 976 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 CHAF1BQ13112 559 aa24.51■■□□□ 1.51
MSX1-201ENST00000382723 TTC23Q5W5X9 447 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms