RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 SCML4Q8N228 414 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 B3GNT7Q8NFL0 401 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 VN1R3Q9BXE9 311 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF639Q9UID6 485 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 AQP7O14520 342 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 DNAJA2O60884 412 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 SCGB1D2O95969 90 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 IGFBP5P24593 272 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF718Q3SXZ3 478 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 CHRFAM7AQ494W8 412 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 AGBL4Q5VU57 503 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 IL17RDQ8NFM7 739 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 KBTBD8Q8NFY9 601 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 SLC44A1Q8WWI5 657 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 URM1Q9BTM9 101 aaKnown RBP8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF221Q9UK13 617 aa8.58□□□□□ -1.04
LIMCH1-202ENST00000381753 RGPD5Q99666 1765 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 CTNSO60931 367 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF432O94892 652 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 GNB1P62873 340 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 RAB11BQ15907 218 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ACSM3Q53FZ2 586 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ATG9BQ674R7 924 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 DPY19L4Q7Z388 723 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 GJC3Q8NFK1 279 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 OR2T4Q8NH00 348 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ST8SIA4Q92187 359 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 OSTF1Q92882 214 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 RTP4Q96DX8 246 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 DCLRE1BQ9H816 532 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 GPN1Q9HCN4 374 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 CSNK1G1Q9HCP0 422 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 UFSP2Q9NUQ7 469 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 FBXL3Q9UKT7 428 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 LNP1A1A4G5 178 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 CRYM-AS1A6NIL9 109 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF850A8MQ14 1090 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 SMAD9O15198 467 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 FZD7O75084 574 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 UTS2O95399 124 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 AHSGP02765 367 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 SERPINA7P05543 415 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 DHRS4L1P0CG22 281 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 TMEM11P17152 192 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ELAVL4P26378 380 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 MTPNP58546 118 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 EIF2B1Q14232 305 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ZC3H3Q8IXZ2 948 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 SLC43A2Q8N370 569 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ELMOD3Q96FG2 381 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 RSRP1Q9BUV0 290 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 BTBD2Q9BX70 525 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 CD248Q9HCU0 757 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ABCB9Q9NP78 766 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 INIPQ9NRY2 104 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 FKBP14Q9NWM8 211 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 DHRS12A0PJE2 317 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 OR6C76A6NM76 312 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF264O43296 627 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 PF4V1P10720 104 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 GRPRP30550 384 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 PLA2G5P39877 138 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 FZD2Q14332 565 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 MAPK11Q15759 364 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 IZUMO2Q6UXV1 221 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 SHFQ7M4L6 423 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 PERPQ96FX8 193 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ATF6BQ99941 703 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 STEAP1Q9UHE8 339 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 KLHL21Q9UJP4 597 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 GON4LQ3T8J9 2241 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 CD8B2A6NJW9 211 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 FBP2O00757 339 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 PRKD3O94806 890 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 IFNA21P01568 189 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ST6GAL1P15907 406 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 GRIA1P42261 906 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 MAGEA3P43357 314 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 TRAP1Q12931 704 aaKnown RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 SEMA3BQ13214 749 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 PIP5KL1Q5T9C9 394 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ANKRD16Q6P6B7 361 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 SLC23A3Q6PIS1 610 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 PLEKHG7Q6ZR37 379 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 AMER2Q8N7J2 671 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 C2CD4AQ8NCU7 369 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 MORN4Q8NDC4 146 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 OR52N2Q8NGI0 321 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 COQ8AQ8NI60 647 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 NUDT8Q8WV74 236 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 MVB12AQ96EY5 273 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 RANBP9Q96S59 729 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 TCEAL2Q9H3H9 227 aaPredicted RBP8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 RHBDL2Q9NX52 303 aa8.57□□□□□ -1.04
LIMCH1-202ENST00000381753 ZNF222Q9UK12 451 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms