RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 MKKSQ9NPJ1 570 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 EQTNQ9NQ60 294 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SLC2A6Q9UGQ3 507 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FBXW11Q9UKB1 542 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MAFBQ9Y5Q3 323 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TRPM6Q9BX84 2022 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 G3V2L1 256 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CLDN5O00501 218 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SLC35A2P78381 396 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 EMX1Q04741 257 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MFGE8Q08431 387 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 RIPPLY2Q5TAB7 128 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ENTHD1Q8IYW4 607 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FBXL6Q8N531 539 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TRAM1L1Q8N609 369 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PLPP5Q8NEB5 264 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 OR6F1Q8NGZ6 308 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 LRCH3Q96II8 777 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FCRL4Q96PJ5 515 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CXXC1Q9P0U4 656 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SERTAD3Q9UJW9 196 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ELF5Q9UKW6 265 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ARHGEF17Q96PE2 2063 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FXYD6-FXYD2A0A087WZ82 144 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 RRP8O43159 456 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 TRAPPC6AO75865 159 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 DBIP07108 87 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 CFHP08603 1231 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ITGB5P18084 799 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 MC3RP41968 323 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 B2MP61769 119 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PKIAP61925 76 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 NFATC2Q13469 925 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SURF2Q15527 256 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 CTU2Q2VPK5 515 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM151AQ8N4L1 468 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 OR4K17Q8NGC6 315 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SLC35F5Q8WV83 523 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ST8SIA4Q92187 359 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 EMID1Q96A84 441 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FAM46AQ96IP4 442 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 NUDT16L1Q9BRJ7 211 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SEC11CQ9BY50 192 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 WWTR1Q9GZV5 400 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FXYD6Q9H0Q3 95 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PELI2Q9HAT8 420 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 MMP26Q9NRE1 261 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PLXNB2O15031 1838 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 IGLV3-22A0A075B6J6 115 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ACOT8O14734 319 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FFAR3O14843 346 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 GPR42O15529 346 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 HRO43593 1189 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SLC16A8O95907 504 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SOD2P04179 222 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 CCR9P51686 369 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 HTRA3P83110 453 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 RTL8BQ17RB0 113 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 POMZP3Q6PJE2 187 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 CMIPQ8IY22 773 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 OR2AJ1Q8NGZ0 328 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 MZB1Q8WU39 189 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PYCR2Q96C36 320 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 GNPNAT1Q96EK6 184 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 AGO3Q9H9G7 860 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FBRSQ9HAH7 460 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 DNAJB11Q9UBS4 358 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 INSL5Q9Y5Q6 135 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 KLRG2A4D1S0 409 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 C5orf52A6NGY3 159 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM212A6NML5 194 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 E5RGE8 158 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ZNF217O75362 1048 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 NT5EP21589 574 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 RPS15P62841 145 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 AANATQ16613 207 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 C6orf136Q5SQH8 315 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FTMTQ8N4E7 242 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 OR2L2Q8NH16 312 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 DNASE1L2Q92874 299 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 NINJ1Q92982 152 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 F2RL3Q96RI0 385 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 EBF4Q9BQW3 602 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 INPP5KQ9BT40 448 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 URM1Q9BTM9 101 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ALOXE3Q9BYJ1 711 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 IPPKQ9H8X2 491 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 TTC28Q96AY4 2481 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 A0A1W2PQ09 198 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 A8MU76 341 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 NPIPA2E9PIF3 369 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 J3QRK9 145 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PEX10O60683 326 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 CDRT1O95170 752 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ACP5P13686 325 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 GM2AP17900 193 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 FKBP2P26885 142 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 CD34P28906 385 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms